Rhodoferax sp. BAB1: HTY51_05650
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Entry
HTY51_05650 CDS
T08955
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
rhob
Rhodoferax sp. BAB1
Brite
KEGG Orthology (KO) [BR:
rhob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rhob03009
]
HTY51_05650 (rimO)
Enzymes [BR:
rhob01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HTY51_05650 (rimO)
Ribosome biogenesis [BR:
rhob03009
]
Prokaryotic type
ribosomal protein modification factors
HTY51_05650 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
QKO21403
UniProt:
A0A6N0BPK4
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All DBs
Position
1159900..1161300
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AA seq
466 aa
AA seq
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MNDVLSPAAGTQPPKVGFVSLGCPKALTDSELILTQLSAEGYQTSKTFQGADLVIVNTCG
FIDDAVKESLDTIGEALAENGKVIVTGCLGAKTGEDGGNMVKQMHPSVLAVTGPHATQEV
MDAVHAHLPKPHDPFIDLVPGAFGEAGLKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDL
VSRPVGDVLKEAKALFEGGVKELLVISQDTSAYGVDVKYRTGFWDGKPVKTRMLDLVQSL
GELAEAHGAWVRLHYVYPYPHVDDILPLMATGKVLPYLDVPFQHSHPEVLRRMKRPASGE
RNLERIQRWREICPELVIRSTFIAGFPGETEEEFEHLLGFLREAQIDRAGCFAYSPVQGA
AANELPGMLPEALREERRARFMAVAEEVSTQRLQRRIGATMQVLVDSAPALGRKGGVGRS
YADAPEIDGLVQLLPPEKISKTLKVGEFTRARIVGTQGHDLVAVPV
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatgtcctgtctccagctgccggtacgcagcctcccaaagtcggttttgtcagc
ctgggctgccccaaggcgctgaccgattccgaactcatcctcacccagctcagtgccgag
ggttaccagacctccaagaccttccagggggcggatctggtcatcgtcaacacctgcggt
ttcatcgacgatgccgtcaaggaaagcctggacaccatcggcgaggccctggccgagaac
ggcaaggtcatcgtgacgggctgcctgggcgccaagaccggtgaggacggcggcaacatg
gtcaagcagatgcaccccagcgtgctggccgtgaccggcccgcatgccacgcaggaggtg
atggacgcggtgcacgcgcatctgcccaagccgcacgaccccttcatcgacctggtgccg
ggcgccttcggcgaggccgggctcaagctcacgccgcgccactatgcctacctgaagatc
agcgagggctgcaaccaccgctgcaccttctgcatcatcccttcgatgcgcggtgacctg
gtgtcgcgaccggtgggtgatgtgctgaaggaagccaaggccctgttcgaaggtggtgtg
aaggaactgctggtgatcagccaggacacctcggcctacggtgtggatgtgaagtaccgc
accggtttctgggacggcaagccggtcaagacgcgtatgctggacttggtgcagtccctg
ggtgagctggccgaggcgcacggcgcctgggtgcgcctgcattacgtctatccctacccc
catgtggacgacatcctgccgctgatggccaccggcaaggtgctgccttatctggatgtg
ccgttccagcacagccaccccgaggtgctgcggcgcatgaaacgcccggccagcggcgag
cgcaatctggagcgcatccagcgctggcgcgagatctgccccgagctggtgatccgcagc
accttcatcgctgggttcccgggcgagaccgaagaggaattcgagcacctgctgggtttc
ctgcgcgaggcgcagatcgaccgtgccggctgttttgcctacagcccggtccagggtgcg
gcggccaacgaattgccgggcatgttgcccgaggccctgcgcgaggagcgccgggcccgg
ttcatggcggtcgctgaagaggtgtcgacgcagcgcctgcagcgccgcatcggtgccacc
atgcaggtgctggtggactcggccccggccctgggccgcaagggcggggtgggtcgcagc
tacgccgacgcgcccgagatcgacggcctggtgcagttgctgccgccggagaagatcagc
aagacgctgaaggtcggggagttcacacgggcgcgcatcgtcggcacgcagggccacgat
ctggtggcggtgccggtgtga
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