Rhodobacter xanthinilyticus: LPB142_12505
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Entry
LPB142_12505 CDS
T04631
Name
(GenBank) protein nirD
KO
K22225
siroheme decarboxylase [EC:
4.1.1.111
]
Organism
rhp
Rhodobacter xanthinilyticus
Pathway
rhp00860
Porphyrin metabolism
rhp01100
Metabolic pathways
rhp01110
Biosynthesis of secondary metabolites
rhp01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rhp00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
LPB142_12505
Enzymes [BR:
rhp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.111 siroheme decarboxylase
LPB142_12505
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Motif
Pfam:
AsnC_trans_reg2
HTH_AsnC-type
HTH_24
AsnC_trans_reg
Motif
Other DBs
NCBI-ProteinID:
AOZ70040
UniProt:
A0A1D9ME37
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Position
complement(2569770..2570768)
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AA seq
332 aa
AA seq
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MPLLTDLDARILDDWQRHFPLVPEPFRAMAEALDVDQGVVLARLTQLRATGTMARVGATC
RPNTVGASSLAAMAVPDWRVEEVAAIISAEPGVNHSYLRENDWNIWFVVTAPDLAERDAI
VARIEAASGLEVLMLPLKRAFNIDLGFALGGPRHALSLDRPADLSVLEAGDRALLQALTD
GLDLVARPYAALGARLGLSEAAVIERIETLTRARIITRLGVIVRHRALGWRSNAMVAWNL
PDERIGAAGQALVRHPGVTLCYERARRPKWDYPLFCMIHARSRREAFEVLEGAAALPELA
GASKQVLFSIRCFKQTGALLAGPGAASGLAAE
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgttgaccgatctcgacgcccgtattctcgacgactggcaacgtcatttcccg
ctggtgcccgagcctttccgggcgatggccgaggcgcttgacgtcgatcagggggtggtt
ctggcgcggctgacgcagctgcgcgcgaccggcacgatggcgcgcgtcggtgcgacctgc
cggcccaatacggtcggcgcctcgagccttgcggcgatggcggtgcccgattggcgcgtc
gaggaggtggcggcgatcatcagcgccgagccgggggtgaaccattcctatctgcgcgag
aatgactggaacatctggttcgtggtcaccgcgcccgaccttgccgagcgcgacgcgatc
gtggcgcggatcgaggcggcctcggggctcgaggtgctgatgctgccgctcaagcgcgcc
ttcaacatcgatctgggctttgcgctgggcggcccgcgccatgcgctctcgctcgaccgg
ccggcggatctgtcggtgctcgaggcgggcgaccgggcgctcttgcaggcgctgaccgac
gggctcgatctggtggcgcggccctatgcggcgctgggcgcgcggctcgggctgagcgaa
gcggcggtgatcgagcggatcgagacgctcacccgcgcgcggatcatcacccggctgggc
gtgatcgtgcgccaccgcgcgctgggctggcgctcgaacgcgatggtcgcctggaacctg
cccgatgagcggatcggcgcggcggggcaggcgctggtgcgccatccgggcgtgacgctc
tgctatgagcgcgcgcgccgcccgaaatgggattatccgctgttttgcatgatccatgcg
cgctcgcggcgcgaggccttcgaggtgctcgagggggccgccgcgctgcccgagctcgcc
ggggcgagcaaacaggtgctgttctcgatccgttgtttcaaacagaccggcgcgctgctt
gcgggcccgggcgcggccagcgggctcgcggcggaatga
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