Rhizobium sp. 11515TR: CKA34_03405
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Entry
CKA34_03405 CDS
T06097
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase (NADP(+))
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
rhr
Rhizobium sp. 11515TR
Pathway
rhr00250
Alanine, aspartate and glutamate metabolism
rhr00310
Lysine degradation
rhr00350
Tyrosine metabolism
rhr00650
Butanoate metabolism
rhr00760
Nicotinate and nicotinamide metabolism
rhr01100
Metabolic pathways
rhr01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rhr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
CKA34_03405 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
CKA34_03405 (gabD)
00310 Lysine degradation
CKA34_03405 (gabD)
00350 Tyrosine metabolism
CKA34_03405 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
CKA34_03405 (gabD)
Enzymes [BR:
rhr01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
CKA34_03405 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
CKA34_03405 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
CKA34_03405 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
ASW05032
UniProt:
A0A248W2V6
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Position
complement(709265..710746)
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AA seq
493 aa
AA seq
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MSFTTAMTKHVPFSSRLLRAAGYINGAWVGGGATKTFDVINPATGEVLASLPDMGAAETT
AAIDAAYSAQVAWAARPAKERAAILRKWFDLMIANADELAAILTAEMGKPLPEARGEILY
AASYVEWYAEEAKRIYGETIPAPSNDKRMVVIKQPVGVVGTITPWNFPAAMIARKIAPAL
AVGCTVVSKPAEQTPLTAIALAVLAEEAGIPPGVLNIIVGLDGPAIGRELCGNAKVRKIS
FTGSTEVGRILMRQCADQIKKVSLELGGNAPFIVFDDADLDAAVEGAMASKYRNAGQTCV
CANRIYVQSNVYDAFAAKLAAKVGELSVGDGFKPGVTVGPLIDEQGVAKAEDHVRDAVSK
GARIVAGGKRIEGVGTFFAPTILTGVDRSMKVAREETFGPVAPLFRFDAVEDVIQQANDT
EFGLAAYFFAGDLKKVWRVAEALEYGMVGINTGLMSSETAPFGGIKQSGLGREGSRHGAD
DYLEMKYLCIGNL
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttacaacagcaatgaccaagcatgttcccttctcttcgcgcctcctgcgcgcc
gccggctatatcaacggcgcctgggtgggcggcggggcgacgaagaccttcgatgtcatc
aatcccgcgacaggcgaagtgcttgcctcgctgccggatatgggcgccgccgagacgacg
gcagcgatcgatgccgcctatagtgcccaagtagcctgggccgcccgcccggccaaggaa
cgagccgcaatcttacgcaaatggttcgatctcatgatcgccaacgccgatgagctggcg
gcaatcctgaccgccgaaatgggcaagccgctgccggaagccagaggcgagatcctctat
gccgcctcctacgtcgaatggtatgcggaagaggccaagcgcatctatggcgaaaccatc
cccgcgccgtccaacgacaagcgcatggtcgtcatcaagcagccggtcggcgtcgtcggc
acgattacgccctggaatttcccggccgccatgatcgcccggaagatcgcaccggccctt
gctgtcggctgcaccgtcgtctcgaagccggccgagcagacgccgctgacggcgatcgcg
ctggccgttctcgccgaagaagcaggcattcccccaggcgttctcaacatcatcgtcggc
ctcgatggcccggcgatcggccgcgagctttgcggcaatgcgaaggtgcgcaagatcagc
ttcacgggctcgacggaggtcggccgcatcctgatgcgccagtgcgccgaccagatcaaa
aaggtcagcctcgaactcggcggcaacgcgcctttcatcgtctttgatgacgccgatctc
gatgccgccgtcgaaggcgccatggcttcgaaatatcgcaatgccggccagacctgtgtc
tgcgccaaccgcatctatgttcagtccaacgtttatgacgcctttgccgccaagcttgcc
gcgaaagtgggcgaactttccgtgggtgacggcttcaagccaggcgtgaccgtagggccg
ctgatcgacgaacagggtgtcgccaaggccgaggatcatgtgcgggatgccgtctccaag
ggcgcccgcattgtggcgggcgggaagcgcatcgagggtgtcggcaccttcttcgcgccg
acgatcctgaccggcgtcgaccggagcatgaaggtcgcccgcgaggaaaccttcggtcct
gttgcaccgcttttccgcttcgacgccgtcgaggatgtcattcagcaggcgaatgatacc
gaattcggcctcgccgcctatttcttcgccggagacctgaaaaaggtctggcgcgtggcg
gaagcgctggaatacggcatggtcggcatcaataccggcctgatgtcgtcggaaacggca
cccttcggcggcatcaagcaatcggggctcggccgcgaaggctcgcgccacggcgccgac
gactatctggaaatgaagtatctctgcatcggcaatctatag
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