Rhizobium sp. 11515TR: CKA34_15335
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Entry
CKA34_15335 CDS
T06097
Name
(GenBank) tetracycline resistance MFS efflux pump
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
rhr
Rhizobium sp. 11515TR
Brite
KEGG Orthology (KO) [BR:
rhr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhr02000
]
CKA34_15335
01504 Antimicrobial resistance genes [BR:
rhr01504
]
CKA34_15335
Transporters [BR:
rhr02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
CKA34_15335
Antimicrobial resistance genes [BR:
rhr01504
]
Gene variants
Tetracycline resistance genes
Transporters
CKA34_15335
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
OATP
Motif
Other DBs
NCBI-ProteinID:
ASW08173
LinkDB
All DBs
Position
complement(3112236..3113492)
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AA seq
418 aa
AA seq
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MIDQKFARRGLFLVFLILFLDVIGIAIIMPVMPKYLEELTGASVSAAATEGGWLLLAYAA
MQFLFSPLIGNLSDRFGRRPLLLASVLTFAIDNFICAIAGSYWMLFVGRILAGISGASFS
TCSAYIADISNDENRAKNFGLIGMAFGVGFVLGPVIGGFLGEFGPRVPFYGAAALAFLNF
VGAYFLLPETLDAKHRRPFEITRANPFGALRQMRRYQGIGWVCVVMFLNWLAHGVYPAVW
AFVTSYRYDWSEGQIGFSLAVYGIGAAIAMGLVLPRLVPVLGEWKTAVLGMVFSCLGLIG
YAFSWQGWMVYAVIVLTVIENVADAPLRSIAASKVPPSAQGELQGALGSLTSITAIIGPV
LFPYLFQYYTAPTAPLVFAGAPFIMSAILVVGGLVVLVMKVRKTEPKAVAQSQAGEAA
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatcagaaattcgcccgtcgaggcctgttcctcgtcttccttatcctcttcctc
gacgtcatcggcatcgcgatcatcatgcctgtcatgccgaaatatctggaggagttgacg
ggtgcttcggtcagcgcggcggcaaccgaaggcggctggctgttgctggcctatgccgct
atgcagttcctattttcgccgttgatcggcaatctgagcgatcgtttcggccgccggccg
cttcttctggcctccgtgctgaccttcgcgatcgacaatttcatctgtgcgattgccggc
tcctactggatgttgtttgtcggccgtattctcgccggcatcagcggcgcaagtttttcg
acctgctcggcctatatcgccgatatcagcaatgacgagaaccgcgcgaagaatttcggc
ctgatcggcatggctttcggcgttggttttgtgcttggtcccgtcatcggcggcttcctc
ggcgagttcgggccgcgcgtgcctttctacggcgcggcggctctggccttcctgaatttc
gtcggcgcctatttcctcttgccggaaacgctggatgccaagcatcgccggcccttcgag
atcacacgcgccaatccgttcggcgcgctcagacaaatgcgccggtatcagggcatcggc
tgggtctgcgtcgtgatgttcctgaactggctggcgcacggcgtctatcccgccgtatgg
gctttcgtcacctcctatcgctacgactggagcgaagggcagatcggcttctcgctggct
gtctatgggatcggcgccgccattgctatgggtctggtgttgccacggctggtgcctgtt
ctcggcgagtggaagactgcagtgctcgggatggtgttttcctgtctcggcctgatcggc
tacgctttttcatggcaaggctggatggtttacgcagttatcgtcctgacggtcatcgaa
aatgtcgcggatgcgccgttgcgatcgattgcagccagcaaggttccgccatccgcgcag
ggcgaattgcagggcgcgctcggtagcctgacgagtattactgccatcatcgggccggtg
ctgtttccatatctgttccagtattataccgcgccaaccgcacccctcgtttttgccggt
gcgcccttcatcatgagcgcaattctggtggtcggcgggcttgtcgtgcttgtgatgaag
gttcgcaagacggaaccgaaagcggtcgcgcaatcgcaagcgggcgaggcggcctaa
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