Rhodococcus sp. PBTS 1: A3Q40_03310
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Entry
A3Q40_03310 CDS
T05182
Symbol
gabD1
Name
(GenBank) Succinate-semialdehyde dehydrogenase [NADP(+)] 1
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
rhu
Rhodococcus sp. PBTS 1
Pathway
rhu00250
Alanine, aspartate and glutamate metabolism
rhu00310
Lysine degradation
rhu00350
Tyrosine metabolism
rhu00650
Butanoate metabolism
rhu00760
Nicotinate and nicotinamide metabolism
rhu01100
Metabolic pathways
rhu01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rhu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
A3Q40_03310 (gabD1)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
A3Q40_03310 (gabD1)
00310 Lysine degradation
A3Q40_03310 (gabD1)
00350 Tyrosine metabolism
A3Q40_03310 (gabD1)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
A3Q40_03310 (gabD1)
Enzymes [BR:
rhu01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
A3Q40_03310 (gabD1)
1.2.1.20 glutarate-semialdehyde dehydrogenase
A3Q40_03310 (gabD1)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
A3Q40_03310 (gabD1)
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Motif
Pfam:
Aldedh
baeRF_family2
DUF4880
Motif
Other DBs
NCBI-ProteinID:
AMY20671
UniProt:
A0A143QCU0
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All DBs
Position
3549796..3551172
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AA seq
458 aa
AA seq
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MTTYKTVNPADGTTVKEFETLDGAGVERALADAHAGFQTWRKTSPKHRADILHKVADLYT
ERSDELARTISLEMGKPLTESQGEVELSSNIYRYYADHGPSLLEDEKLDVPGAEDTVLQR
KPVGALVGVMPWNFPYYQVARFAGPNLMVGNTILLKHAPNCPQSALLMEEIFQQAGLPQD
AYINIFATNDQIADMIADSRVQGVSLTGSERAGTSVAETAGRNLKKVVLELGGSDVFILL
DSDDMDATVESATRARLSNAGQACNAAKRILVAEEVYDDFVTKLVASFEAVQTGDPLDAK
TTLGPLSSQTAADTLIEQIDDAVAKGATLLTGGKKIDGPGAYVQPTLLTDVTPDMRAYSE
ELFGPAGVIYKVESAQQAIELANSSAYGLSGSVWSADLDKARDVAEQLEVGMAFVNEHGT
TLPGLPFGGVKRSGVGRELGPWGMDEFVNKKLVRVSAK
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
gtgacgacctacaagactgtcaatcctgccgacggcacaacggtgaaggaattcgagact
ctcgacggtgccggcgtcgagcgtgcacttgccgatgcacacgccggtttccagacatgg
cgcaagacctcaccgaagcatcgcgccgacatcctgcacaaggtcgccgatctctacacc
gagcgttccgacgaactggcccgcacgatctcgctcgaaatgggcaagcccctcaccgaa
tcccagggcgaggtggaactgtcgtcgaacatctaccgctactacgccgaccacggcccg
tcgcttctcgaggacgagaagctcgacgtacccggcgcggaagacactgtgctgcagcgt
aagccggtgggcgctctcgtcggcgtcatgccgtggaacttcccgtactaccaggttgcc
cggttcgccggcccgaacctgatggtgggcaacacgattctgctcaagcatgcacccaat
tgcccgcagtcggcactgctgatggaggagatcttccagcaggccggactcccccaggac
gcgtacatcaacatcttcgcgaccaacgaccagatcgccgacatgatcgccgactcccgc
gtccagggcgtctcgctcaccggtagtgaaagggccggaacctccgtcgccgagacggcc
ggacgcaacctcaagaaggtcgtcctcgaacttggcggatcggacgtattcatcctgctc
gactccgacgacatggacgccaccgtcgaatccgctacccgggcgcggctgtccaacgca
ggccaggcctgcaatgccgccaagcgcatcctggtcgccgaggaggtctacgacgacttc
gtcaccaagctcgtcgcgtcgttcgaagccgtgcagaccggcgacccgctggacgcgaag
accaccctcggacccctgtcgtcgcagaccgccgccgacacgctgatcgagcagatcgac
gacgccgtcgccaagggcgcaacgctgctgaccggcggtaaaaagatcgacggaccgggt
gcctacgtacagccgacattgctgaccgacgtcaccccggacatgcgcgcctatagcgaa
gagctgttcggaccggccggcgtgatctacaaggtcgaaagcgcgcagcaggcaatcgaa
ttggcgaactcctccgcatacggtctcagcggctcggtgtggagcgctgacctcgacaag
gcccgcgacgtggccgagcagctcgaagtgggcatggcgttcgtcaacgaacacggcacc
acgctgccaggtctgccgttcggcggagtcaagcgctccggcgtcggccgcgaactgggc
ccgtggggcatggacgagttcgtgaacaagaagctcgtgcgcgtctcagcgaagtag
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