Rhodoferax koreense: RD110_11900
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Entry
RD110_11900 CDS
T04721
Name
(GenBank) oligogalacturonate lyase
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
rhy
Rhodoferax koreense
Pathway
rhy00040
Pentose and glucuronate interconversions
rhy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
RD110_11900
Enzymes [BR:
rhy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
RD110_11900
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Motif
Pfam:
Pectate_lyase22
PD40
Motif
Other DBs
NCBI-ProteinID:
APW37815
UniProt:
A0A1P8JVP4
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Position
2510095..2511243
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AA seq
382 aa
AA seq
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MSKHTNRRFEFASTHDRDTGARVTRLTPVDVTCHRTYFYQKCFTNDGARLLFGGQFGPHW
NYHLLDLASQTAVQLTDQAEENTFGGFLSPDDRFLYFVRAERQLIRLSLDTLAEEVVYTV
PPDWVGYGTWVANTACTKMVGIEIAATDWFPLTDWQKFREMFHAKPRCRLIRIDLRTGER
DVVHENNLWLGHPQYRPFDDHTVAFCHEGNHDLVDARMWFVDEDGRNVRCAKEHLPGESC
THEFWVPDGSAMVYVSYLQGQRERWICSLDPVTLENRRLMQMPPCSHLMSNHDGSLLVGD
GANTPVDVADPGSHRIESDPYLHLFDLKAGTTRRIARHDSSWAVYKGNRQVTHPHPSFTP
DERQVLYTSDRDGEPALYLADL
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcacaccaaccgccggttcgaattcgccagcacccatgaccgcgacaccggc
gcgcgcgtcacgcggctgacacctgtggacgtgacctgtcaccgcacctatttctaccag
aagtgtttcacgaacgacggtgcccggctgcttttcggcgggcagttcggtccgcactgg
aactaccacctgctggacctggcttcgcagactgccgtgcagttgaccgaccaggccgag
gaaaacaccttcggcggcttcctgagcccggacgatcggtttctctacttcgtgcgtgcc
gaacgccagttgatccggttgtcgctcgacacgctcgcggaggaggtggtctacaccgtg
ccgccggactgggtaggttatggcacctgggtcgccaacaccgcctgcaccaagatggtg
ggcatcgaaatcgccgcaacagactggttcccgctgaccgactggcagaagtttcgcgag
atgttccatgcgaagccgcgctgccggctgatccgcatcgacctgcgcaccggcgagcgc
gacgtggtgcacgagaacaacctgtggctcggccatccgcagtaccggccgttcgacgac
cataccgtggccttctgccacgagggcaaccacgacctggtggacgcgcggatgtggttc
gtcgacgaggacgggcgcaatgtgcgctgtgcgaaggaacacctgccgggtgagagctgc
acgcatgaattctgggtgccagatggctcggcaatggtctacgtctcctacctgcagggc
cagcgcgagcggtggatctgttcgctcgacccggtcacgctggagaaccgccgcctcatg
cagatgccgccgtgctcgcatctgatgagcaaccacgacggcagcctgctcgtgggcgac
ggtgcgaacacgccggtggacgtggccgacccaggcagccaccgcatcgaaagcgacccc
tatctgcacctcttcgacctgaaggccggcaccacgcgccgcatcgcgcggcacgacagc
agctgggcggtctacaaaggcaaccggcaggtcacccatccccatccctcgttcacgccc
gatgaacggcaggtgctctacacctcggaccgggacggcgagcccgcgctgtacctggcc
gatctctga
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