KEGG   Rhodoferax koreense: RD110_16905
Entry
RD110_16905       CDS       T04721                                 
Symbol
putA
Name
(GenBank) trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase
  KO
K13821  RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
Organism
rhy  Rhodoferax koreense
Pathway
rhy00250  Alanine, aspartate and glutamate metabolism
rhy00330  Arginine and proline metabolism
rhy01100  Metabolic pathways
rhy01110  Biosynthesis of secondary metabolites
Module
rhy_M00970  Proline degradation, proline => glutamate
Brite
KEGG Orthology (KO) [BR:rhy00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    RD110_16905 (putA)
   00330 Arginine and proline metabolism
    RD110_16905 (putA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rhy03000]
    RD110_16905 (putA)
Enzymes [BR:rhy01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase
     RD110_16905 (putA)
  1.5  Acting on the CH-NH group of donors
   1.5.5  With a quinone or similar compound as acceptor
    1.5.5.2  proline dehydrogenase
     RD110_16905 (putA)
Transcription factors [BR:rhy03000]
 Prokaryotic type
  Ribbon-helix-helix
   Other families
    RD110_16905 (putA)
SSDB
Motif
Pfam: Aldedh Pro_dh Pro_dh-DNA_bdg PRODH BAF
Other DBs
NCBI-ProteinID: APW40757
UniProt: A0A1P8K441
LinkDB
Position
complement(3638561..3642334)
AA seq 1257 aa
MPQSFAAPFADALAAHDEVPPLRAPITAAYRRPEPEALPPLLAAARLPTAMAAQAQALAQ
RIALQLRQRKNATGRAGLVQGLLQEYALSSQEGVALMCLAEALLRIPDAATRNALIRDKI
ANGQWQSHAGRSPSVFVNAATWGLLLTGKLVATHSESGLSTTLTRLIGKGGEPLIRKGVD
MAMRMMGEQFVTGETIAQALDHAKKLEAEGFRYSYDMLGEAALTAHDAERYRQSYEQAIH
AIGKASAGRGVYEGPGISIKLSALHPRYSRAQHARVMAELYPTLRDLTLLAHRYDIGLNI
DAEEADRLELSLDLLEKLCFEPGLAGWNGIGFVIQGYQKRCPFVIDFVVDLARRSGHRLM
VRLVKGAYWDSEIKRAQIDGLAGYPVYTRKAYTDVSYLACAKKLLAAPDAVYPQFATHNA
HTLSAIYHMADPASYQPGQYEFQCLHGMGEPLYEQVVGPVAAGKLNRPCRIYAPVGTHET
LLAYLVRRLLENGANTSFVNRIADPTIAIELLVEDPVATVEHMAAREGAVGLPHAAIPLP
PALYGRARANSTGLDLANDDQLRQLGDALQKSAQEAWVAGPLMASAASAGQAPAPVLNPA
DLRDVVGQVTDATLADVSQAVADAAAFAPEWAATAPADRANQLEAAADLLQANLPRLLGL
LSREAGKTFANGIAEVREAVDFLRFYAAQARSDFAADTHKPLGPMVCISPWNFPLAIFVG
QVAAALAAGNPVLAKPAEQTPLVAAEAVRLLWRAGVPRAALQLVPGRGESVGAALVGDAR
VQGVMFTGSTEVARILQKTLAARLGADGRPVPLIAETGGQNAMIVDSSALVEQVVTDVLS
SAFDSAGQRCSALRVLCVQEEVADRLIDMLKGAMAENRIGNPALLAVDVGPVIDAEARDG
VERHVAAMQGRGRKVFRQARNDGNSDATAHGTFVVPTLIELDNLAELQREVFGPVLHVVR
YRRRDLGALIGQINDTGYGLTLGVHTRIDETIAQVVQNAKAGNVYVNRNIVGAVVGVQPF
GGEGLSGTGPKAGGPLYMLRMLATRPDDVMARALAASDPGNPPSASDGGAVAAPPTALAA
LQAWAHGGGRTVLAAACERFGRLSRSGHSRTLVGPTGERNVYTLLPREAVLCLAADDADR
LVQLAAVLAVGSTAVWPAGADTGRLLASLPLEVQQAVATAQDWTAPTVHFDAVLQHGEAA
ALRATLQALAARRGAIVGMRALVPGDTAVPLESLVVERALSVNTAAAGGNASLMTIG
NT seq 3774 nt   +upstreamnt  +downstreamnt
atgccacagtccttcgctgccccgttcgccgatgcccttgccgcccacgacgaggtgccg
ccgctgcgcgcccctatcaccgcggcctaccgccgcccggagcccgaagcactgccgccg
ctgctggcggccgcgcgcctgccgaccgccatggccgcgcaggcccaggcgctcgcgcaa
cgcatcgccctgcaactgcgtcaacgcaagaacgccaccggccgcgccggcctggtgcag
ggtctgctgcaggaatacgccttgtcgtcgcaggaaggcgtggcgctgatgtgcctggcc
gaggcgctgctgcgcattcctgacgcggccacgcgcaacgcgctgatccgcgacaagatc
gccaacggccagtggcagtcgcatgcgggccgcagcccgtcggtgttcgtcaacgccgcc
acctggggcctgctgctcaccggcaagctggtggccacgcacagcgagtcaggcctgtcg
accacgctcacccgcctcattggcaagggcggcgagccgctgatccgcaagggcgtggac
atggccatgcgcatgatgggcgagcagttcgtcaccggcgagaccattgcccaggcgctg
gaccacgcgaaaaagctcgaggccgaaggtttccgctattcgtacgacatgctcggcgag
gccgcgctcaccgcgcatgacgccgagcgctaccgccagtcctatgaacaggcgatccat
gccatcggcaaggcgtcggccggccgcggtgtctacgaggggccaggcatctcgatcaag
ctctcggccctgcacccgcgctacagccgcgcgcaacatgcccgcgtgatggccgagctg
tacccaacgttgcgcgacctcacgctgctggcccaccggtacgacatcggcctcaacatc
gatgccgaagaagccgaccggctggagctgtccctcgacctgttggaaaagctgtgtttc
gagccgggcctggccggctggaacggcatcggcttcgtgatccagggctaccagaagcgc
tgtcccttcgtgatcgacttcgtggtcgacctggcgcggcgcagcggccaccggctgatg
gtgcggctggtgaagggcgcctactgggacagcgagatcaagcgcgcgcagatcgacggc
ctggccggctatccggtctacacgcgcaaggcctataccgacgtgtcctacctggcctgc
gcgaagaagctgctggccgcgccggatgcggtctatccgcaattcgccacgcacaacgcc
cacacgctgtcggccatctaccacatggccgacccggccagctaccagcccggccagtac
gaattccagtgcctgcacggcatgggcgagccgctgtacgagcaggtcgtcggcccggtc
gcggccggcaagttgaaccggccctgccgcatctacgcccccgtgggcacgcatgaaacc
ctgctggcctacctggtgcgccggctgctggaaaacggcgccaacacctcgttcgtgaac
cgcatcgcggacccgaccatcgccatcgaattgctggtggaagacccggtcgccaccgtc
gaacacatggcggcgagggagggggcggtcggcctgccgcatgccgcgatcccgctgccg
ccggcgctgtacggccgggcgcgcgccaattccaccggcctcgacctggccaacgacgac
cagttgcgccagctcggcgacgcgctgcagaagtcggcgcaggaggcctgggtggccggg
ccgctgatggcctcggcggccagcgcgggccaggcgcccgcaccggtgctcaatcctgcc
gatttgcgcgacgtggtcggccaggtgaccgacgcgacgctcgccgatgtgagccaggcc
gtcgccgatgccgcggctttcgcccccgagtgggccgccacggcgccagcggaccgcgcg
aaccagctcgaagccgcggccgacctgctgcaggccaacctgccgcgcctgctcggcctg
ctgtcgcgcgaggccggcaagacctttgcgaacggcattgccgaggtgcgcgaggccgtg
gacttcctgcgtttctacgcggcgcaggcgcgcagcgatttcgcggccgacacccacaag
ccgctggggccgatggtctgcatcagcccgtggaattttccgttggcgatctttgttggc
caggtggccgcggccctggccgccggcaatccggtgctggccaagccggccgaacagacg
ccgctggtcgcggccgaggccgtgcgcctgctgtggcgggccggcgtgccgcgcgcggcg
ctgcagttggtgcctggtcggggcgagagcgtgggtgccgcgctggtgggtgatgcgcgg
gtgcagggggtgatgttcaccggctccaccgaggttgcgcgcatcctgcagaagacgctg
gccgcgcggctcggcgccgatggccggcccgtgccgctgatcgccgagaccggcgggcag
aacgcgatgatcgtcgactcctcggccctggtggagcaggtggtgaccgatgtgttgtcc
tccgccttcgacagcgccggccagcgttgttcggcgctgcgcgtgctgtgcgtgcaggag
gaggtggccgaccggctgatcgacatgctcaagggcgcgatggccgagaaccgcatcggc
aacccggcgctgctggcggtggacgtcggcccggtgatcgacgccgaagcccgtgacggc
gtcgagcgccatgtggcggcgatgcagggccgtggccgcaaggtgttccgccaggcgcgc
aatgacggcaatagcgatgcgacggcgcacggtaccttcgtcgtgccgacgctgatcgag
ctggacaatctggccgagctgcagcgcgaggtcttcggcccggtgctgcacgtcgtgcgg
taccgcaggcgcgacctgggcgcgctcatcggccagatcaacgataccggctacggcctc
acgcttggcgtgcacacgcgcatcgacgagaccatcgcccaggtggtgcagaacgccaag
gccggcaacgtctacgtgaaccgcaacatcgtcggcgccgtggtcggcgtgcagccgttc
ggtggcgagggcctgtcgggcaccggccccaaggccggtggccccctgtacatgctgcgc
atgctggccacgcgaccggacgacgtgatggcgcgggcgctggcggcgtccgatccgggc
aacccgccatcggcgtcggatggcggcgccgtcgccgctccaccgaccgcgctggccgcg
ttgcaggcctgggcccacggcggtgggcgcaccgtgctggcggccgcctgcgaacgcttc
ggccgcctgtcgcgcagcggccattcgcgcacgctcgtcggcccgaccggcgagcgcaac
gtctacaccctgctgccgcgcgaggccgtgctgtgcctggccgccgacgatgccgaccgc
ctggtgcaactggccgccgtgctggcggtgggcagcaccgcggtgtggccggccggtgcc
gacaccggccgcctgctggcctcgctgccgctggaagtgcagcaggccgtcgccaccgcg
caggattggaccgcccccaccgtgcatttcgatgccgtgctgcaacatggcgaggcggcc
gcgctgcgcgccacgctccaggcgctggccgcgcgccgtggcgccatcgtcggcatgcgg
gccctggtgcccggcgacacggcggtgccattggagagcctggtggtggaacgcgcgctg
agcgtcaacacggcggctgcgggcggcaatgcgagtctgatgaccatcggttga

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