Rhodoferax koreense: RD110_16980
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Entry
RD110_16980 CDS
T04721
Name
(GenBank) protocatechuate 3,4-dioxygenase
KO
K04101
protocatechuate 4,5-dioxygenase, beta chain [EC:
1.13.11.8
]
Organism
rhy
Rhodoferax koreense
Pathway
rhy00362
Benzoate degradation
rhy00624
Polycyclic aromatic hydrocarbon degradation
rhy00627
Aminobenzoate degradation
rhy01100
Metabolic pathways
rhy01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rhy00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RD110_16980
00627 Aminobenzoate degradation
RD110_16980
00624 Polycyclic aromatic hydrocarbon degradation
RD110_16980
Enzymes [BR:
rhy01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.8 protocatechuate 4,5-dioxygenase
RD110_16980
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Motif
Pfam:
LigB
Motif
Other DBs
NCBI-ProteinID:
APW38686
UniProt:
A0A1P8JY61
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Position
complement(3659971..3660825)
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AA seq
284 aa
AA seq
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MAKITASVYTSHVPAIGAALDLGKTQEPYWQPVFQGYDFGKQWLKDNKPDVIFLVFNDHA
TAFSLEMIPTFAIGTAAEYTPADEGWGPRPVPKVIGHPELAAHIAQSVIQQDFDLTIVNK
MDVDHGLTVPLSLMCGQPEAWPCPVIPFAVNVVQYPVPSGRRCFELGKAIRKAVESFDKP
LNVQIWGTGGMSHQLQGPRAGLINKEFDNMFLDRLISDPEGLASVPHIDYVREAGSEGIE
LVMWLIARGAMSDVAGGPAPTVKNRFYHVPASNTAVGHLILENN
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatcaccgccagcgtctacacctcgcacgtgcccgccatcggcgccgcactc
gacctgggcaagacgcaggaaccctactggcagcccgtgttccagggctacgacttcggc
aagcaatggctgaaggacaacaagccggacgtcatcttcctggtcttcaacgaccatgcc
acggctttcagcctggagatgattccgacgttcgccatcggcaccgcggccgaatacacg
ccggccgacgaaggctggggcccacgccccgtgcccaaggtcatcggccatcccgaactg
gccgcgcacatcgcgcagtccgtcatccagcaggatttcgacctcaccatcgtcaacaag
atggacgtggaccatgggctcaccgtaccgctgtcgctaatgtgcggccagcctgaggcc
tggccctgcccggtgattccgttcgccgtgaacgtggtgcagtaccccgtgccttctggc
cggcgctgcttcgagctcggcaaggcgattcgcaaggccgtcgaatccttcgacaagccc
ctgaacgtgcagatctggggcaccggcggcatgagccaccagctgcagggcccgcgcgcc
gggctgatcaacaaggagttcgacaacatgttcctggaccgcctcatcagcgatccggaa
ggcctggccagcgtgccgcacatcgactacgtgcgcgaagccggctccgaaggcatcgaa
ctcgtgatgtggctgatcgcgcgcggcgccatgagcgacgtggccggtggccccgcgccc
accgtgaagaaccgcttctaccacgtgcccgcgtccaacacggccgttggccatctcatc
ctggagaacaactaa
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