Rhodoferax koreense: RD110_23140
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Entry
RD110_23140 CDS
T04721
Name
(GenBank) 3-methylcrotonyl-CoA carboxylase
KO
K13777
geranyl-CoA carboxylase alpha subunit [EC:
6.4.1.5
]
Organism
rhy
Rhodoferax koreense
Pathway
rhy00907
Pinene, camphor and geraniol degradation
rhy01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rhy00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
RD110_23140
Enzymes [BR:
rhy01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.5 geranoyl-CoA carboxylase
RD110_23140
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Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
ATP-grasp
Dala_Dala_lig_C
Biotin_lipoyl_2
HlyD_3
LAL_C2
Motif
Other DBs
NCBI-ProteinID:
APW39739
UniProt:
A0A1P8K163
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Position
5004934..5006868
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AA seq
644 aa
AA seq
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MRSIRNLLVANRGEIALRIMRTARAMGIQTVAVYSTADRDAAHVAYADQAVCIGGAAPSA
SYLDISALLRAAAATGADAVHPGYGFLSENAAFAEACTQAGLVFVGPSPRAIDAMGDKAR
AKRFMREAGLPCIPGYDGDDQSAATLAAEAERIGYPALVKATAGGGGRGMRVVESARDFG
PALESARSEARNAFGDERMLIERVVREPRHIEIQVLVDRYGQGVHFGERDCSVQRRHQKV
IEEAPAPGLPAGLRDRLGEAAVSAAVKLGYEGVGTFEFLVEGGERFYFMEMNTRLQVEHP
VTEAIAGVDLVAWQLRVAMGEPLGITQADIGFTGHAIEVRLCAEDETRGFMPQSGRIDLF
RAPAGIRVEHAVASGMEIPPYYDSMFAKLIAHGRDREEARRKLVKALAETVVFGVKTNRQ
SLVRFLEHPDFAAGGVDTGFLQRHQAALAVPAAPPLALALAALVLCQAGAANPSRAAPST
LLLRDDAGATHEVRVSGGEHGSFQVVSGEHEHTLALRLREAPQAVFTYAGVDRPLLWQVV
EGRVHVQWAGLAASFTDVTHAPAAPAGDAAADGRVRALSNGRVASVLVAPGAVVEAGAPL
LTVEAMKMEHMHVAAANGVVRAVLVAVGDSVATGRVLVEMEPAP
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
gtgcgctccatccgcaacctgctggtggccaaccgtggcgagatcgcgctgcgcatcatg
cgcacggcgcgcgccatgggcatccagacggtcgccgtctactcgacggcggaccgcgac
gcggcgcacgtggcctatgccgaccaggccgtgtgcatcggcggcgcggccccctcggcg
tcgtacctcgacatcagcgccctgctgcgcgctgccgcggccaccggtgccgatgccgtg
catccgggctacggcttcctttcggaaaacgcggccttcgccgaggcctgcacgcaggcc
gggctggtcttcgtcggtccatcgccgcgcgccatcgacgccatgggcgacaaggcgcgg
gccaagcgcttcatgcgcgaggccggactgccctgcatcccgggctacgacggcgacgac
cagagtgccgccacgctggccgcggaggccgagcgcatcggctaccccgcgctggtgaag
gccaccgccggcggcggcgggcgcggcatgcgggtggtcgagtcggcgcgcgacttcggg
ccggcactggagtcggcgcgctcggaggcccgcaatgccttcggcgacgaacgcatgctg
atcgaacgcgtggtgcgcgagccgcgccacattgagatccaggtgctggtcgaccgttac
ggccagggcgtgcatttcggcgaacgcgactgctcggtccagcgccgccaccagaaggtc
atcgaggaagcgccggcaccgggcctgcccgccgggctgcgcgatcggctcggcgaggcc
gccgtgtccgcggcggtcaagctgggctacgaaggcgtgggcaccttcgagttcctggtc
gagggtggcgaacggttctacttcatggagatgaacacccggctgcaggtggagcatccg
gtgaccgaggccatcgccggggtcgacctggtggcctggcagctgcgggtggccatgggc
gagcccctgggcatcacccaggccgacatcggcttcacgggccacgccatcgaggtgcgc
ctgtgcgcggaagacgagacacgcggcttcatgccgcagagcggccgcatcgacctgttc
cgcgcgccggccggcatccgcgtggagcatgccgtggcctcgggcatggagatcccgccc
tactacgactcgatgttcgccaagctgatcgcgcacggccgcgaccgcgaggaagcccgg
cgcaagctggtcaaggccctggccgagaccgtcgtgttcggcgtgaagaccaaccggcaa
tcgctggtccgcttcctggagcatcccgacttcgccgccggtggcgtcgacaccggtttc
ctgcagcgccaccaggcggcgctcgcggtgccagccgccccaccgctggcgctggcgctg
gccgcgctggtgctgtgccaggccggtgccgctaacccaagccgcgccgcgccgtcgacc
ctgctgctgcgtgacgacgccggcgccacccacgaggtgcgcgtatcgggcggcgaacac
ggcagcttccaggtggtgagcggcgagcacgagcacacgctggcgctgcgcttgcgcgaa
gcgccgcaggccgtcttcacctatgcgggcgtggaccgtccactgctgtggcaggtggtg
gagggccgcgtgcacgtgcagtgggccggactggccgcgtccttcaccgacgtcacccac
gcccccgccgcacccgccggcgatgcggccgcggacggccgcgtgcgtgcgctgtccaac
gggcgcgtcgcctcggtcctggtggcaccgggtgcggtggtcgaggccggcgcacccctg
ctcaccgtggaggccatgaagatggaacacatgcacgtggccgccgccaatggcgtggtg
cgcgcggtgctggtggccgtgggcgactccgtggcgacggggcgcgtgctggtcgaaatg
gagccggcgccctga
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