Rhodoplanes sp. Z2-YC6860: RHPLAN_36030
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Entry
RHPLAN_36030 CDS
T04290
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
rhz
Rhodoplanes sp. Z2-YC6860
Brite
KEGG Orthology (KO) [BR:
rhz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rhz03009
]
RHPLAN_36030
Enzymes [BR:
rhz01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
RHPLAN_36030
Ribosome biogenesis [BR:
rhz03009
]
Prokaryotic type
ribosomal protein modification factors
RHPLAN_36030
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AMN42035
UniProt:
A0A127EXJ9
LinkDB
All DBs
Position
complement(4199902..4201266)
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AA seq
454 aa
AA seq
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MKTPRATRKPNSKTTAQTAPAVSFVSLGCPKALVDSERIITRLRAEGYELSREHKGADLV
IVNTCGFLDSAKAESLDAIGQALAENGKVIVTGCMGAEPEQITAKFPNLLAITGPQQYES
VVAAVHKAAPPQHDPFLDLVPPEGIKLTPRHYAYLKISEGCNNRCTFCIIPKLRGDLVSR
PAADVLREAERLVTAGVKELLVISQDTSAYGVDIKYAASQWKDREVKARFLDLSRELGTL
GAWVRLHYVYPYPHVDDVIELMSEGVVLPYLDIPFQHAAPDVLKRMKRPAAQEKTLTRIA
RWREICPDITLRSTFIVGFPGETDQDFELLLDWLDEAALDRVGCFRYEPVAGAVSNDLAA
PVPKDVVEERWHRFMQRQQAISTKRLKRKVGTRQQVIIDEVGPSVAKGRSKGDAPEIDGA
VYVASRRPLRVGEIATVKIDRADEYDLHGTVVGF
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaacaccccgcgccaccagaaaacccaactccaaaaccacggcccagacggcgccg
gcggtgagcttcgtctcgctcggttgcccgaaggcgctggtcgattccgagcgcatcatc
acgcggctgcgcgctgaaggttatgagctcagccgcgagcataagggcgccgacctcgtc
atcgtcaacacctgcggtttcctcgatagcgccaaggcggagtcgctcgacgccatcggc
caggcgctcgccgagaacggcaaggtgatcgtcaccggctgcatgggcgcggagcccgag
cagatcacggccaagtttccgaacctgctcgcgatcaccggtccgcagcaatatgagagc
gtggtcgccgcagtccacaaggccgccccgccgcagcacgatccgtttctcgacctggtg
ccgcccgagggcatcaagctcacgccgcgccactatgcgtatctgaagatttccgagggc
tgcaacaaccgctgcaccttctgcatcatccccaagctccgcggtgacttggtgtcgcgg
cccgccgccgacgtgctgcgcgaggccgagcggctggtgacggcgggcgtcaaagagctg
ttggtgatctcgcaggacacctcggcctatggcgtcgacatcaaatatgcggcgagccag
tggaaggaccgcgaggtcaaggccaggttcctcgatctctcccgcgaactcggcacgctc
ggcgcctgggtgcggctgcattacgtttatccctacccgcatgtcgatgacgtcatcgag
ctgatgtccgagggcgtggtgctgccctatctcgacattccattccagcacgcagcgccc
gatgtgctcaaacgcatgaagcggcccgccgcgcaggagaagacgctgacgcggatcgcg
cgctggcgggagatttgtcccgacatcaccctgcgctcgaccttcattgttggcttcccg
ggcgagaccgatcaggacttcgaactgctgctcgactggctcgacgaggccgccctcgat
cgcgtcggctgcttccgctacgaaccggtcgccggcgcggtatccaacgatctcgccgct
cccgtgccgaaggatgtggtcgaggagcgctggcatcgcttcatgcagcgccagcaggcg
atctcaacgaagcggctgaagcgcaaggtcggcacccgccagcaggtgatcatcgacgag
gtcggcccctcggtcgccaagggccgctccaagggcgacgcgccggagatcgacggcgcg
gtctatgtggcgagccgcagaccgctccgcgtcggcgaaatcgcgacggtgaagatcgac
cgcgccgacgagtacgacctgcacggcactgtggtcggattctag
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