Roseovarius indicus: RIdsm_00722
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Entry
RIdsm_00722 CDS
T06222
Symbol
lcfB_2
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K18661
malonyl-CoA/methylmalonyl-CoA synthetase [EC:
6.2.1.76
6.2.1.-]
Organism
rid
Roseovarius indicus
Pathway
rid00280
Valine, leucine and isoleucine degradation
rid01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RIdsm_00722 (lcfB_2)
Enzymes [BR:
rid01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.76 malonate---CoA ligase
RIdsm_00722 (lcfB_2)
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GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
QEW24938
UniProt:
A0A0T5P4P9
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Position
742505..744016
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AA seq
503 aa
AA seq
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MANPLYDALFGKYAGEASPFLYLPDGTVISHAGFLEMAARIAGVITGAGLKPGDRLAAQV
EKSAEALALYAACVQAGVIFLPLNTAYTADELTYFIDNSGAAMIVCDPGKLEMLAPIAER
LGCQVETLGADGGGSLMEKAAEMPGEFATVDREGGDLAAFLYTSGTTGRSKGAMLTQDNL
LSNARTLTECWRFSDKDVLLHALPIFHTHGLFVATNIVLLSGGAMIFLPKLDIDRMVEWM
PKATAMMGVPTFYTRLLDDERFTRELAEHMRLFVSGSAPLLAETHERFEKRTGHRILERY
GMTETNMNTSNPYDGERRAGTVGFPLPGVELKVCDPESGEEVPQGEVGMVEVRGPNVFKG
YWQMPEKTAAELREDGFFITGDLGKIDEDGYVHIVGRDKDLIISGGYNIYPKEIELLLDE
QPGVLESAVIGVPHPDFGETVVGVLVAEAGERPDLGAIEAAAQQSLARFKHPRKLVVVDS
LPRNTMGKVQKNVLREEYKHLFA
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggccaacccattgtatgatgcgcttttcgggaagtatgccggggaggcgtcgccgttc
ctgtatttgcccgatggcacggtgattagtcatgccgggttcctcgagatggcggcgcgg
atcgcgggggtgattaccggggccgggctgaagcccggtgaccggctggcggcgcaggtg
gagaaatcggcggaggcgctggcgctttatgcggcctgcgtgcaggccggggtgatcttc
ctgccgctgaacacggcctatacggcggatgagctgacctatttcatcgataacagcggt
gcggcgatgatcgtctgcgatccggggaagttggagatgctggcgccgattgccgagcgg
ctgggatgccaggtggagacactgggcgccgatggtggcgggagcttgatggagaaggcc
gcggagatgccgggggagtttgccacggtggaccgggagggcggcgatctggcggcgttc
ctgtatacgtcggggacgacggggcggtcgaagggggcgatgctgacgcaggacaacctg
ttgtcgaatgccaggaccctgacggagtgctggcggttctcggacaaggacgtgctgctt
catgcactgccgatctttcacacgcacgggctattcgtggcgacgaacatcgttctgttg
tcgggcggggcgatgatcttcctgccgaagctggatatcgaccggatggtcgagtggatg
ccgaaggcgacggcgatgatgggggtgccgaccttctatacgcggctgctggatgacgag
cggttcaccagggaactggccgagcatatgcggctgttcgtgtcggggagcgcgcccttg
ctggccgagacgcatgagcggttcgaaaagcgcaccgggcaccggattctcgaacgctac
gggatgaccgagacgaacatgaacacctcgaacccctatgacggggaacggcgggcgggg
acggtggggttcccgctgccgggggtggagctgaaggtgtgcgaccccgagagcggcgaa
gaggtgccgcagggcgaggtcggcatggtcgaggtgcgggggcccaatgtcttcaagggt
tactggcagatgccggagaagacggcggcggaattgcgcgaggacgggttctttatcacc
ggcgacctgggtaagatcgacgaggatggctatgtgcatatcgtcgggcgggacaaggac
ctgatcatctcgggcgggtacaacatttaccccaaggagatcgaattgctgctggatgag
cagcccggcgtgctggaaagcgcggtgatcggcgtgccgcatccggatttcggcgagacg
gtcgtgggcgtgctggtggccgaggcgggggagagaccggaccttggggccatcgaggcg
gcggcgcagcagtcgctggcaaggttcaagcatccgcgcaagctggtggtggtggacagc
ctgccgcgcaacaccatgggcaaggtgcagaagaacgtgcttcgggaggagtacaagcac
cttttcgcgtaa
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