Roseovarius indicus: RIdsm_01752
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Entry
RIdsm_01752 CDS
T06222
Name
(GenBank) Farnesyl diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
rid
Roseovarius indicus
Pathway
rid00900
Terpenoid backbone biosynthesis
rid01100
Metabolic pathways
rid01110
Biosynthesis of secondary metabolites
Module
rid_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
RIdsm_01752
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rid01006
]
RIdsm_01752
Enzymes [BR:
rid01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
RIdsm_01752
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
RIdsm_01752
2.5.1.29 geranylgeranyl diphosphate synthase
RIdsm_01752
Prenyltransferases [BR:
rid01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
RIdsm_01752
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
QEW25959
UniProt:
A0A0T5PDA7
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All DBs
Position
1887760..1888629
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AA seq
289 aa
AA seq
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MPLTDRIEGAVTRALGTTQGGSAPKQLAEALGYACLPGGARIRPTILLSVAMACGDDKPR
MADAAAASLELIHCASLVHDDLPCFDDAEVRRGKPSVHRAYSQPLAVLTGDSLIILAFQT
LARAAAVDGARAAQLSLTLSERTGMPNGICAGQGWESEPEIDLGAYHRSKTAALFIAATQ
MGAISAGHEPEAWYDLGALIGEAFQVADDLRDALLDEATLGKPVGQDDLHGRPNAVAELG
VEGAFKHLSDILAGAIASIPSCPGEAALAKIVSMQAERIMPAVPARYQV
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgccgcttaccgaccggatcgaaggcgccgttacacgggcgttggggaccacgcagggc
ggatcggcgccgaagcaactggccgaggcgctgggctatgcctgtttgccgggtggggca
aggatcaggccgacgatccttttgtcggtggcgatggcctgtggcgatgacaagccacgg
atggccgatgcggcggcggcgtcgctggagcttattcactgtgcgagcctcgtgcatgac
gacctgccgtgcttcgacgatgcggaggtcaggcgcgggaagccgtcggtgcaccgggcc
tattcgcagcccttggcggtgctgacgggggatagcctgatcatcctggcgttccagacg
ctggcgcgggccgcggcggtggatggggcacgggcggcgcagctgtcgcttaccttgtcg
gaacggacggggatgccgaacgggatctgtgccgggcagggctgggaaagcgagccggag
attgatctgggcgcgtaccatcggtcgaagacggcggcgctgttcatcgcggcgacgcag
atgggcgcgatttccgccgggcatgagccggaggcgtggtatgaccttggcgccctgatc
ggcgaggcgttccaggtggcggatgatttgcgcgatgcattgctggacgaggcgacgctg
ggcaagccggtggggcaggatgacctgcacgggcggcccaatgcggtggcggagcttggg
gtcgagggggcgttcaagcatctgtcggatattctcgctggggcgatcgcctcgatcccc
tcgtgcccgggcgaggcggcgctggcgaagatcgtgtcgatgcaggcggagcggatcatg
cccgcggtgccggcgcgttaccaggtctag
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