Rhizobium indigoferae: U5G49_003078
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Entry
U5G49_003078 CDS
T09660
Name
(GenBank) tetracycline resistance MFS efflux pump
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
rif
Rhizobium indigoferae
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rif02000
]
U5G49_003078
01504 Antimicrobial resistance genes [BR:
rif01504
]
U5G49_003078
Transporters [BR:
rif02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
U5G49_003078
Antimicrobial resistance genes [BR:
rif01504
]
Gene variants
Tetracycline resistance genes
Transporters
U5G49_003078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
TRI12
OATP
Motif
Other DBs
NCBI-ProteinID:
WQN37930
LinkDB
All DBs
Position
complement(3049627..3050877)
Genome browser
AA seq
416 aa
AA seq
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MLDPKFVRRGLFLVFIILFLDIIGIAIIMPVLPAYLEQLTGGSVSDAAIDGGWLMLVYAG
MQFLFAPLLGNLSDRFGRRPILLLSVLTFAIDNFICGIATSYWMLFVGRVLAGISGGSFA
TCSAYIADISTEENRAKNFGLIGIAFGVGFTIGPVIGGLLGEFGPRVPFLGAAALSLVNF
IAACFLLPETLEAKNRRRFEWKRANPLGALRQMRHYPGIGWVSLVMFLFFLAHAVYPSVW
SFVSTYRYGWSEGQIGLSLGIYGIGAAIVMGLVLPRIVPVLGEWKTALLGLCFSAVGLTG
YAFAWEGWVVYVIIVATVMENVADPPLRSIAAGMVPPSAQGELQGALTSLSSITTILGPL
IFTQMFGYFTRPEAPVTFAGAPYLAAALFILLAAGVFLMRVRVRVREPAEALEAAG
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaccctaaattcgttcgccgcggcctttttctggtctttatcatcctcttcctc
gacattatcggcatcgccatcatcatgccggtgctgcccgcttatctggagcaactgacc
ggcggcagcgtcagcgatgcggcgattgacggcggctggctgatgctcgtctatgccggc
atgcaattcctgtttgcgccgctgctcggaaacctgtccgaccgtttcggccgccggccg
atccttttgctttcggtgctgaccttcgcgatcgacaatttcatctgtggcatcgccacc
agctactggatgctgttcgtcggccgcgtgcttgccggtatcagtggcggcagcttcgcc
acctgctcggcctatatcgccgatatcagcaccgaggagaaccgcgcgaagaatttcggg
ctgatcggcatcgccttcggcgtcggcttcacgatcggtcccgtcatcggcggtttgctc
ggcgaattcggcccgcgtgtgccgttcctcggcgcggccgcgctatcgctggtcaatttc
atcgccgcctgcttcctgctgccggaaacgctggaggcgaaaaaccgccgccggttcgag
tggaagcgcgccaatccgctcggcgcgttgcgccagatgcgccattatcccggcatcggc
tgggtcagcctcgtcatgttcctgttcttcctggcgcatgccgtctatccctcggtctgg
tcgttcgtctcgacctatcgctacggttggagcgagggacagatcggtttgtcgctcggc
atttacggcatcggcgccgcgatcgtcatgggcctggttctgccgcggatcgtgccggtg
ctcggcgagtggaagaccgctcttctcggcctctgcttctcggccgtcgggctcaccggt
tatgctttcgcctgggagggctgggtcgtctatgtcatcatcgttgcgactgtcatggaa
aacgtcgccgatccgccgctgcgcagcatcgcggccggcatggtgccgccctcggcacag
ggcgagctgcaaggcgcgctcaccagcctcagcagcattaccaccatcctcggaccgctg
atcttcacgcagatgttcggttatttcacgcggcccgaggcgccggtcacttttgccggc
gcgccctatcttgccgccgccctgttcatcctgttggccgccggcgtgttcctcatgcgg
gtccgagtccgcgtccgtgagccggccgaggcgctggaagcggcaggttga
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