Agrobacterium pusense IRBG74: BN877_I2727
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Entry
BN877_I2727 CDS
T02867
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase, Fe-S protein
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
rir
Agrobacterium pusense IRBG74
Pathway
rir00020
Citrate cycle (TCA cycle)
rir00190
Oxidative phosphorylation
rir00650
Butanoate metabolism
rir01100
Metabolic pathways
rir01110
Biosynthesis of secondary metabolites
rir01120
Microbial metabolism in diverse environments
rir01200
Carbon metabolism
Module
rir_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rir_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rir_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
BN877_I2727 (sdhB)
00650 Butanoate metabolism
BN877_I2727 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
BN877_I2727 (sdhB)
Enzymes [BR:
rir01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
BN877_I2727 (sdhB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_17
Fer4_8
Fer4_10
Fer2
Fer4_9
Fer4_7
Motif
Other DBs
NCBI-ProteinID:
CDI09611
UniProt:
A0A1L9CC93
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Position
complement(2633661..2634440)
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AA seq
259 aa
AA seq
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MVELALPKNSQINEGKVWPKPDGAKNVREYRVYRWNPDDGQNPRIDTFYIDVDDCGPMVL
DALLYIKNNIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGMDEINGTVKVYPLPHMP
VVKDLVPDLSNFYAQHRSIEPWLKTVSPTPAKEWKQSHEDRLKLDGLYECILCACCSTSC
PSYWWNGDRYLGPAVLLQAYRWLIDSRDEATGERLDNLEDPFRLYRCHTIMNCAQACPKG
LNPAKAIAEIKKMMVERRV
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggttgaacttgctctccccaagaattcccagatcaacgaaggcaaggtctggccgaag
ccggatggtgccaagaatgtgcgcgaataccgcgtctatcgctggaacccggatgacggc
cagaacccgcgcatcgacactttctatattgatgtcgatgattgcggaccgatggttctc
gatgcgcttctttacatcaagaacaacatcgacccgacgctgacgctacgccgctcctgc
cgcgaaggcatctgcggttcctgcgcgatgaacatcgacggcaccaatacgctcgcctgc
accaagggcatggacgagatcaacggcacggtgaaggtttatccgctgccgcatatgcct
gtcgtgaaggaccttgttcctgacctgtcgaacttctacgcccagcaccgctcgatcgag
ccctggctgaagacggtttcgcccacacccgccaaggaatggaagcagagccatgaggat
cgcctgaagctggacggtctttatgagtgcattctctgcgcctgctgctccacgtcctgt
cccagctactggtggaatggcgaccgttatctgggtccggccgttctgctgcaggcctat
cgctggctgatcgacagccgcgatgaggcgaccggcgagcgtctcgacaatctcgaggac
ccgttccgtctctaccgctgccatacgatcatgaactgcgcgcaggcttgcccgaaaggc
ttgaacccggccaaggcgattgcggaaatcaagaagatgatggttgagcgccgcgtctga
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