Agrobacterium pusense IRBG74: BN877_II0399
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Entry
BN877_II0399 CDS
T02867
Symbol
soxA1
Name
(GenBank) sarcosine oxidase, alpha subunit
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
rir
Agrobacterium pusense IRBG74
Pathway
rir00260
Glycine, serine and threonine metabolism
rir01100
Metabolic pathways
Module
rir_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
rir00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BN877_II0399 (soxA1)
Enzymes [BR:
rir01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
BN877_II0399 (soxA1)
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
BN877_II0399 (soxA1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
Pyr_redox_3
NAD_binding_8
FAD_binding_2
Thi4
HI0933_like
FAD_binding_3
GIDA
DAO
AlaDh_PNT_C
Fer2_BFD
Lycopene_cycl
adh_short
3HCDH_N
NAD_binding_9
Motif
Other DBs
NCBI-ProteinID:
CDI10199
UniProt:
U4PYV5
LinkDB
All DBs
Position
linear:complement(406101..409091)
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AA seq
996 aa
AA seq
DB search
MNSYRVSGRGRVDASRSVSFTFDGKTYRGVKGDTVASALLANGVHLMGRSFKYHRPRGPV
AAGSEEPNALIGTRRSAGRFEPNTRATVQEIWDGLETTSQNKYPSLKFDIGAVNDMAYML
FSAGFYYKTFMWPKSFWNKVYEPFIRAAAGLGVSPTEEDPDTYASRNLHCDVLIVGAGPA
GLAAARAAAVEGLKVVLVDENAEAGGTLLSEPQAKIDGKPAWVWLADEVEALKDRGVKVM
TRTTAIAYYHQNMIGLCEKLTDHLETVPKDVPRERLWRVRARQVVLAQGALEKPLVFHGN
DRPGVMLAGSAQTYLNRYGVKVGNRPVVVTSHDSAWYAAFDLHGAGAPVQAIVDTRAKVR
EELVNEARALGIPVKLSHTVTATSGRLRVKSVHVNPVNGSTVGAGQDIACDAVLMSGGWT
PSLHLFSHTQGKIAWDDERTTFLPALTNEDCVIAGAGRGLWGIEAALKDGAERGREVVAA
LGKTANVSSHAVDHDRIGSGVSHTELPSDRDAGKAKAFVDYQNDVTAKDLRLAVREGMRS
IEHVKRYTTNGMATDQGKMSNINGLNIAAEALGKRQPEVGLTTFRPPYTPTTFGAFAGYH
RGAHFEVTRKTQIDSWSEAHGAVYEPVGQWRRAWYFPKSGEDMDAAVRRECRAVRQSVGI
FDASTLGKIEVVGPDAVEFMNRMYTNPWTKLAAGRCRYGLLLGDDGFIRDDGVIGRMTDD
RFHVTTTTGGAARVLNMMEDYLQTEWPDLNVWLTSTTEQWSTIALNGPNAAKLLAPLVEG
VELTEEAFPHMSCAECTVAGMPARLFRVSFTGEIGFEVNVPAPLGRKLWEILWESGQQYG
ITPYGTETMHVLRAEKGYIIVGQDTDGTVTPYDAAMGWAVGKNKPDFVGKRGLARPDLVA
KGRRHLVGLLTEDRSKLEEGAQIVFDPKQPIPMKMVGHVTSSYHSDAVGQPIALALVEGG
HERMGETVYIPMLDRTIAAKITGMVFVDPENTRLKI
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgaactcctatcgcgtttccggccggggccgggtggatgcttcccgttcggtcagcttc
accttcgacggcaagacctatcgcggcgtcaagggcgataccgtcgcctccgcgcttctc
gccaatggcgtgcatctcatgggccgctcgttcaaataccaccgcccgcgcggcccggtg
gcggcgggttccgaggagccgaatgcgctgatcggcacccgccgtagcgccggccggttc
gagccgaatacccgcgccacggtgcaggaaatctgggacgggctggaaaccacctcgcag
aacaaatatccgagcctgaaattcgatatcggcgctgtcaacgacatggcctatatgctg
ttttcggccggtttttactacaagacctttatgtggccgaagagcttctggaacaaggtc
tatgagcccttcatccgcgcggccgcgggtctcggcgtttcgccgacggaagaagatcct
gacacctatgcctcgcgcaacctgcattgcgatgtgctgattgtcggtgccggtcccgcc
ggtctcgcagccgcgcgcgcggcggcggtcgagggtctcaaggtcgtgctggtcgatgaa
aatgccgaagccggcggcacgctgctctcggaaccgcaggcgaagattgatggcaagccc
gcttgggtctggcttgctgacgaagtggaggcgctgaaggatcggggcgtcaaggtgatg
acgcgtaccacggcgattgcctattaccaccagaacatgatcggcctttgcgaaaagctg
accgaccatctcgaaaccgtaccgaaggatgtgccgcgcgaacgcctctggcgggtaaga
gcccggcaggtggtgctggcgcagggcgcactggaaaagccgctggttttccacggcaat
gaccggccgggcgtgatgctcgcaggttccgcccagacctatctcaaccgctatggcgtc
aaggtcggtaaccggccagtggtggtgacgagccatgacagcgcctggtatgccgctttc
gatcttcacggtgctggcgcacctgttcaggccatcgtcgatacccgcgccaaggtgcgc
gaggagctggtaaacgaggcgcgtgcgctcggcattccggtcaagctctcacatacggtc
acggcgacgtcggggcggttgcgcgtcaaatcggttcacgtcaatccggtgaatggttcc
acggtcggcgcaggtcaggacattgcctgcgatgccgtgctgatgtcgggcggctggacg
ccgtcgctgcatctcttctcccacacacagggtaagatcgcctgggatgacgagcggacg
accttcctgccagcgctcaccaatgaggattgtgtgattgcaggcgccggtcgcgggctc
tggggcatcgaggccgcactgaaggacggtgcggaacgggggcgtgaagtcgttgcagcc
cttggcaagaccgccaatgtttccagtcatgccgtcgatcatgaccgcattggcagcggt
gtatcccacacggaactgccgagcgaccgcgatgccggcaaggcaaaggctttcgtcgat
taccagaatgatgtgaccgccaaggatctgcggcttgccgtgcgcgagggcatgcgctcc
atcgagcatgtcaaacgctacaccaccaatggcatggccaccgatcaaggcaagatgtcc
aacatcaacggcctcaacatcgctgcggaagctctgggcaaacgccagccggaagtgggg
ctcaccaccttccgtccgccctatacgccgacaacctttggggccttcgccggttatcac
cgcggcgcgcatttcgaagtgacgcgcaagacgcagatcgacagctggtccgaggcccat
ggcgcggtctacgagccggtcgggcaatggcgtcgcgcctggtattttccaaagtcgggc
gaggacatggatgccgccgttcgccgcgaatgccgggcggtgcgccagagtgtgggtatt
tttgatgcctcgacgctcggcaagatcgaggttgtcggtcccgatgcggtcgagttcatg
aaccgcatgtataccaatccctggacaaagctggctgccggtcgctgccgttatggcctg
ctgctcggcgatgacggtttcatccgcgacgatggcgttatcggccgcatgaccgacgac
cgtttccacgtcaccaccacgactggcggtgccgcccgggtgctgaacatgatggaggat
tacctccagacggaatggcccgatctcaatgtctggctgacctcgaccacggagcaatgg
tcgaccattgcgctgaacgggccaaatgcggcgaagctgctcgcgccgctggtggaaggt
gtggagctcacggaagaggccttcccgcatatgtcctgcgcggaatgcaccgtggccggc
atgccggcgcggctgttccgggtcagcttcaccggcgagatcggcttcgaggtcaatgtg
cctgcaccgctcggtcgcaagctctgggaaatcctgtgggaatccggtcagcaatatggc
atcacgccttacggcaccgagacgatgcatgtgctgcgtgcggaaaagggctacatcatc
gtcggtcaggacaccgatggcaccgtcacgccctatgacgcggcaatgggctgggccgtg
ggcaagaacaagcccgatttcgtcggcaagcggggtcttgcgcgacccgatctcgtcgcc
aagggccgccgccatctcgtcggccttctgacggaagaccgctcgaagctggaagagggc
gcacagatcgtcttcgacccgaaacagcctatcccgatgaaaatggtcggccacgttaca
tcatcctaccattcggatgccgttggccagccgatcgcgctggcgctggtggagggcggt
catgagcggatgggcgagaccgtctacatcccgatgctggaccgtaccatcgccgcgaaa
atcaccgggatggtctttgtcgatcccgaaaacacccgccttaaaatctga
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