Rahnella inusitata: I2123_06380
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Entry
I2123_06380 CDS
T09790
Name
(GenBank) lysine decarboxylase LdcC
KO
K01582
lysine decarboxylase [EC:
4.1.1.18
]
Organism
riu
Rahnella inusitata
Pathway
riu00310
Lysine degradation
riu01100
Metabolic pathways
riu01110
Biosynthesis of secondary metabolites
riu01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
riu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
I2123_06380
Enzymes [BR:
riu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.18 lysine decarboxylase
I2123_06380
BRITE hierarchy
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Motif
Other DBs
NCBI-ProteinID:
QUT16424
LinkDB
All DBs
Position
1361848..1363995
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AA seq
715 aa
AA seq
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MNIIAIMRPEGAYYKEEPIRELDSALTLLGFQVIYPRDRADLLKLIENNARICGAIFDWD
EHSEELCTEINELNEYLPLYAFINTHSTLDVDVNEMRMVLYFFEYALTAADDIAKRIRQY
TDEYIDTITPPLTKALFKYVEEGKYTFCTPGHMAGTAFLKSPVGTLFYDFFGAKTLKADV
SISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYIVTNGTSTANKIVGMYAAPAGSTVLI
DRNCHKSLAHLMMMTNIVPIYLRPHRNAYGILGGIPKHEFSRQSIEEKITQTENATWPVH
AVITNSTYDGLLYNTDYIKSTLDVASIHFDSAWVPYTNFHPIYEGKSGMSGERVPGKVIY
ETQSTHKLLAAFSQASMIHIKGDYNESTFNEAYMMHTTTSPNYGIVASAETAAAMLRGNP
GRRLINRSVERALHFRKEIQRLREETDGWFFDIWQPEHIDEAQCWPLNPDDNWHGFANAD
TDHMYLDPIKVTILTPGMNEMGTLEEEGIPAALVAKFLDERGVVVEKTGPYNLLFLFSIG
IDKTKSMSVMRGLTDFKRSYDLNLRVKNMLPDLYAEDPDFYRNMRIQDLAQGIHKLIVRH
DLPRLMLEAFDVLPEMKMTPYEMFQHQVRGHIDECDIDELIGKVSANMILPYPPGVPVVM
PGEMITEESRAVLDFLIMLCSIGERYPGFETDIHGARLTEDGRYLVKVLKLPDAE
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgaatattatcgctatcatgcgcccggaaggggcttactacaaagaagagccaatccgc
gaactggatagcgccctgacgcttctcggattccaggtgatttatccccgggaccgcgct
gacttactgaaactcatcgaaaataatgcccgcatttgcggagccatttttgactgggat
gagcacagcgaagagctgtgtacagaaattaatgagctcaacgaatacttgccactgtat
gcgttcatcaatacgcattcgacgctggacgtcgatgtgaatgaaatgcgtatggtgctg
tatttctttgagtatgcgctgaccgccgcggacgatatcgccaaacgcatccgccagtac
accgacgaatacattgataccatcacgccgccgctgaccaaagcgctgtttaaatacgtc
gaggaaggtaagtatacgttttgtacgcctgggcatatggcgggaacggcttttctgaaa
agcccggtcggcacgctgttctatgatttctttggggccaaaacgctgaaggccgacgtg
tctatttcagtcaccgaactcggttctttgctcgatcacaccggtccgcatctcgaagcc
gaagaatatatcgcgcgcacttttggagccgagcaaagttatatcgtcaccaacggtacc
tcgacggccaacaaaattgtcggaatgtacgccgcgccggcgggaagcacggtactgatt
gaccgcaactgccataaatcgctggcgcatctgatgatgatgaccaatatcgtgccgatt
tatctgcgtccgcatcgtaacgcatacggcattcttggcgggatccccaaacacgaattc
tcccgtcaaagtatcgaagagaaaatcacgcaaactgaaaatgccacctggccggtgcat
gccgtcatcactaactccacttacgatggtctgttgtacaacactgactacattaaaagt
acgctggacgtcgcttcgattcattttgattcagcctgggtgccctataccaatttccac
ccgatctacgaggggaaaagcggcatgagcggtgagcgcgtgcctggtaaagtcatttac
gaaacccagtctacgcacaagttactggccgctttttcgcaggcgtcgatgatccacatt
aaaggcgattacaacgaaagcacctttaatgaagcctacatgatgcacaccacgacatcc
cctaactacggcatcgtggcctcagcggaaacggcagccgcgatgctgcgcggtaatcct
ggacggcggctgatcaaccgttccgttgagcgcgcgctgcattttcgtaaagagatccag
agactgcgcgaggaaaccgacgggtggttcttcgatatctggcagccggaacacattgat
gaagctcagtgctggccactcaatccggatgacaactggcatggtttcgccaatgcggat
accgatcatatgtatctggatccgatcaaagtgacgatcctcacgcccggcatgaatgaa
atgggcacgctggaagaagaggggatcccggcggcgctggtggcgaaattccttgatgag
cggggcgtagtggttgaaaagaccggcccctacaatcttctgttcctgttcagcataggc
attgataaaaccaagtctatgagcgtgatgcgcgggctgaccgatttcaaacgcagctac
gatctcaatctgcgcgtcaaaaatatgctgcccgacctttacgcggaagatcccgatttc
tatcgcaatatgcgtattcaggatctggcgcaggggatccacaagctgatcgtccgtcac
gatctgccgcgcttaatgctggaagcctttgatgtcctgccggaaatgaaaatgacgccg
tacgaaatgttccagcatcaggtgcgcggacatatcgacgaatgcgacattgacgaactg
atcggtaaagtttcggccaatatgatcctgccttatccgccaggcgtgccggtggtgatg
ccgggcgagatgatcacagaggaaagccgcgccgtgctcgatttcctgatcatgttgtgt
tcgatcggcgaacgttatccgggctttgaaacggatattcacggtgcgcggctgaccgaa
gacgggcgctatctggtgaaagtccttaaacttcctgacgcggaataa
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