Rhinichthys klamathensis goyatoka (western speckled dace): 130076642
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Entry
130076642 CDS
T09701
Symbol
polr3a
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03020
RNA polymerase
rkg04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
130076642 (polr3a)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
130076642 (polr3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rkg03021
]
130076642 (polr3a)
Enzymes [BR:
rkg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
130076642 (polr3a)
Transcription machinery [BR:
rkg03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
130076642 (polr3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
130076642
NCBI-ProteinID:
XP_056097768
LinkDB
All DBs
Position
Unknown
AA seq
1402 aa
AA seq
DB search
MVKEQFRETDVAKKISHIHFGMKSAEQMRQQAHIQVVSKNLYSQDTSHTPLQYGVLDHRM
GTSEKDRPCETCGKNLADCLGHYGYLDLELPCFHVGYFKAIVGILQMVCKTCSHILLAKE
EKLQFLDYLRRPGLAYLQKRGLKKKISDKCRKKTICVTCSAFNGPVKKCGLLKIIHEKYK
TTKKVIDPMVSDFLQSFDVAIEHNKEVESLLARAQENLNPLVVLNLFRRIPNEDIPLLLM
NPESGKPADLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRMSG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTYPEKVNKANIEMLRKLVRSGPEVHPGANF
IQQRHMQMKRFLKYGNREKMAQELKYGDVVERHMIDGDIVLFNRQPSLHKLSIMAHIARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRTKACQIIASILVGKDEKVKISLPYPAILKPIRLWTGKQI
FSLILKPSKSCPVKANLRTKGKQYSGKGEDLCSNDSFVVIQNSELMCGSLDKGTLGSGSK
NNIFYILLRDWGQEEAADAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKQELLDAG
YKKCDEYIEALKTGRLQQQPGCTAEETLEALILKELSVIRDHAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVADSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIRAVFGCPGEPALSRNELVLTTDSIMKRKDFLC
CRDTFLEALTDTGSDKYLQEIRKFIKTISERIKKTRDKYGINDNGTTEPKVLYQLDRITP
TQLEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVP
RIKEIINASKNISTPIISASLDCDDDADFARLVKGRIEKTLLGEISEYIEEVFLPDDCFI
LVKLSLERIRLLRLEVNAETVRYSICTSKLRVKPGDIAVHGEAVVCVSPRENSKSSMYYV
LQSLKQELPKVVVQGIPQVARAVIHIDEQSGIKKFKLLVEGDNLRAVMATHGVNGNRTTS
NNTYEVEKTIGIEAARSTIINEIQYTMVNHGMSIDRRHVMLLADLMSYKGEILGITRFGL
AKMKESVLMLASFEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHSATK
EPSPPRRPLLFDSPDFHIPLVQ
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagtttagagagacggatgtggccaaaaagataagtcacatccatttt
ggcatgaaatcagcagaacagatgagacaacaggctcatattcaggtggtcagcaagaac
ctgtacagccaggacaccagccacacaccactgcagtatggagtcctggaccaccgcatg
ggaaccagcgagaaggacaggccgtgtgaaacctgcgggaagaacctcgcggactgtctc
ggacactatgggtatctggatctggagctgccctgctttcacgtcggatacttcaaagct
attgttgggatcctacagatggtctgtaagacgtgttctcacatccttctggccaaagag
gaaaagcttcagtttctggattacctgcgcagacccggactggcgtatctgcagaagcgc
ggcctcaagaagaagatttctgacaaatgcaggaagaaaaccatatgcgtgacatgcagt
gcgttcaacggccccgtgaagaaatgtggcttgctgaagatcattcatgagaagtataag
accacgaagaaagtcatcgatcccatggtgtctgatttcctccagtcgtttgatgtcgcc
attgaacacaacaaagaagtggagtcactgctggccagagcacaggaaaacctcaatcct
ctggttgtgttgaatcttttccggaggattccaaacgaggatattcctcttctgctgatg
aatcccgaatccggcaaacccgcggacctgatcctgacgcgcctgttagttcctcccctg
tgcatccggccctccgtcgtcagcgacctcaaatccggcaccaatgaagatgatctgacc
atgaagttaaccgaaatcatcttcctcaacgacgtcatcaagaagcaccgcatgtcagga
gccaaaacccagatgatcatggaggactgggactttctgcagctccagtgcgctttgtac
atcaacagcgagctttcggggatcccgctcaacatggcacccaagaaatggacccgtggc
tttgtgcaaagactcaagggaaaacaggggcggtttcgtggtaacctgtctggaaagaga
gtggatttctccggcagaacggtcatctctcccgacccaaacctcaggattgatgaggtc
gctgtaccggttcacgtcgccaaaatcctcacctacccggagaaggtgaataaagccaac
attgagatgttgaggaagctagtgcgcagcggtcctgaagttcacccaggagcaaatttc
attcaacagagacacatgcagatgaagaggtttttgaagtacggtaatcgagagaagatg
gctcaagagctgaagtacggggacgtggtcgagagacacatgattgatggcgacatcgtg
ctgtttaaccggcagccctctctgcataagctcagcatcatggctcatatcgcgcgtgtg
aaacctcatcggacgtttcgctttaacgagtgtgtgtgtacgccgtacaacgctgacttt
gacggagacgagatgaacctccaccttccgcagacagaagaagccaaagctgaagcgctc
gtcctcatggggacgaaggcgaatctggtcactcccagaaacggtgagccgctgatcgca
gccattcaggactttctgacaggtgcttacctgctcacgctcaaagacactttcttcgac
cggaccaaagcctgtcagatcatcgcctccatcctggtgggaaaagacgagaaagtcaag
atctccctcccttatcctgcgattctcaagccgatcaggttgtggacggggaagcagatc
tttagtctgatactcaagcccagtaagagctgtccagtgaaggccaacctgcgcaccaaa
ggcaaacagtacagcgggaaaggggaggatctgtgttccaacgactcctttgtggtgatc
cagaacagtgagctgatgtgtggcagtctggataaaggaactctgggatccggatccaag
aacaacatcttctacatcttgttgcgagactggggccaagaggaggcggcggatgccatg
tcacgcctggcccgtctggctcccgtttacctctcgaatcgaggcttctccatcgggatc
ggagacgtgacgcccggacagggactcctgaaggccaagcaggagctgctggacgctgga
tataagaaatgtgacgaatatatcgaagccctgaagacgggccggttacagcagcagccg
ggctgcaccgcggaggaaacactcgaggcgttaatcctgaaggagctgtcagtcatcaga
gatcacgctggcagtgcgtgtttgagggaactggacaaaagcaacagcccgctgatcatg
gccctgtgtggatccaaaggttcattcattaacatctcacagatgatcgcttgtgtcggg
cagcaggccatcagcggctcgcgtgttcctgacgggtttgagaaccgctcactgcctcac
tttgaaaagcactccaaactccctgctgcgaagggctttgtggccgacagcttttattct
ggcctgacgcccactgagttcttcttccacacgatggctggtagagaagggctggtcgac
accgctgtgaagacagcagagacgggatacatgcagaggcgtttggtgaagtctctggag
gacttgtgctctcagtacgatctgacggtgcgcagctccaccggtgacatcattcagttc
atctacggcggagacggactcgatcccgcggccatggaggggaaagatgagccactggag
ttcaaaagagtcctcgacaacatcagagcggtgttcggctgtccgggtgagccggcgctg
agcagaaacgagctggttttgaccaccgactccatcatgaagagaaaagactttctgtgc
tgtagagacacgtttctggaggcactgacagacactggcagtgacaagtacttacaggaa
atcagaaagttcataaaaacaatttcggagagaatcaaaaagacacgtgacaagtatggc
atcaatgacaatggaacaacagagcctaaagttctgtaccagttggacaggatcactccg
acccagctggagaagtttctggaaacctgcagagacaaatatatgagggcgcagatggag
ccgggctctgccgtcggagcgctgtgtgcccagagcatcggggagcccggcactcagatg
accctcaagacctttcacttcgccggagtcgcctccatgaacatcactctgggagtcccg
aggatcaaagagatcatcaatgcgtccaagaacatcagtacgcccatcataagtgccagc
ctggactgtgatgatgatgcagatttcgctcggctggtgaagggtcgcattgagaagact
ctcctgggagagatttccgagtacatcgaggaggttttcctgccggatgattgttttatc
ctggtgaaactgtctctagagaggattcgtcttctgaggctggaggtgaacgcagagacc
gtacgttactccatctgcacgtcgaagctgcgtgtgaagccgggtgacatcgcggttcac
ggagaggccgtggtgtgtgtgtctcccagagagaacagcaagagctccatgtactacgtc
ctgcagtcgctcaaacaggagcttcccaaggtggtggtccagggcatccctcaagtggcg
cgtgccgtgatccacattgacgagcagagcgggataaagaagtttaaactgctggtggag
ggagacaatctcagggctgtcatggcaacacacggcgtcaacggcaaccgaacaacatcc
aacaacacgtatgaggtggagaagacgataggcatcgaagcagcgagatccaccatcatt
aatgagatccagtataccatggtaaaccacggtatgagcatcgaccgccggcacgtcatg
ctgctcgcggacctcatgtcctataagggagagattctgggcatcactcgcttcggtctg
gctaagatgaaggagagcgttctcatgctggcgtccttcgagaagacggccgatcatctg
ttcgacgctgcgtatttcggccagaaggactcggtctgcggtgtgtccgagtgcattata
atgggaatccccatgaatatcggcactggactctttaaactcttgcacagcgccacgaag
gagcccagtcccccccgcaggccgctcctcttcgacagtcctgatttccacatccctctg
gtccagtaa
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