Rhinichthys klamathensis goyatoka (western speckled dace): 130076815
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Entry
130076815 CDS
T09701
Name
(RefSeq) protein mono-ADP-ribosyltransferase PARP4-like
KO
K10798
poly [ADP-ribose] polymerase 2/3/4 [EC:
2.4.2.30
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03410
Base excision repair
rkg04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
130076815
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
130076815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rkg03032
]
130076815
03036 Chromosome and associated proteins [BR:
rkg03036
]
130076815
03400 DNA repair and recombination proteins [BR:
rkg03400
]
130076815
Enzymes [BR:
rkg01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
130076815
DNA replication proteins [BR:
rkg03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
130076815
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
130076815
DNA repair and recombination proteins [BR:
rkg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
130076815
BRITE hierarchy
Motif
Pfam:
VIT
PARP
VWA_3
VIT_2
VWA
BRCT_2
VWA_2
BRCT
Motif
Other DBs
NCBI-GeneID:
130076815
NCBI-ProteinID:
XP_056098048
LinkDB
All DBs
Position
Unknown
AA seq
1931 aa
AA seq
DB search
MTVFENCTVVLDVKNVPYKEKKKLRLALLDNGGNVSYVINKECSFVVTSSVNDLSSNRQS
SIQKLRIPVVGTQYVWCCLDEGHLLPLTEHDLAPQLAYPTSEFISCPEGKVSTQIQEKEE
FKGQSEFPKTEIAALEKGGPSLSRFRVYRGGDHELPEFPSHFQVAKYSIFERVKPKTLSV
LELQSARGRKGQQYRVLSSILHEAESAVVQDKLVYCVTSEDAVEAYLLLMKEMETQGFTR
THTLPPEVEHLASYSLQQLLLEEKLNCSSLSQEVGVFVELVWTEALGSLSDILTVPVSRI
SLNDVSRVEGLLLQAQKTQKEDEVKALLEEVNTLLPLRMIDPPSKHKLVSQKLDLCQLIR
DILNVSEATLGSPSPSSLGKYRALRCSIEVVPPQNPEFHVVSQLLHERPVQIQQILRVSR
GVELQMFWEDIGNIKPLLHSTSPSSFVGILSRGLLLPRVGVEQHGIERTDIGNLGGGIYF
SDSLNTSVKYSKPSVTDGSRLLLVCEVALGRCKDLLKKDTTLTCAPEGYHSVHGVHRTPN
RLSEFEDDEFVVYNTEQIRLKYVVQYTLEGDELKEFQPHINTVVELTQLADTSDVLSSDD
SEGLESTKNPLEEMTAGLLDSNGQKIPLQAVNVRCKLMDLLCQVIIFQTYTNKSAVPIEA
KYVFPLEETAAVCGFEAFINGKHVVGKVKEKEQARKEYKQAIEKGHGAYLMDQDAPDVFT
ISVGNLPPGATVLIKVTFITELVVRSGSIVFSLAGSVAPWQQSAALNMTTQTTVEKIGVT
ELQSEGEFSLSMSIEMPYEIINLSSSHRIKTKMTDCKAVVSTLPGQTLGSEGLQVSFSLS
NIHMPRMWVENHPDKYSQACMLVFYPDFKSSGVSSSGDPSSVSDVVILLDSSKSMRGDAM
LNARRIALQVLKSLDRSLKINIISFSTDYKEAFPAPVPLDEASEPARKFIMSCSGAGGGT
ELWRPLQSLSLLSPCRGVRNILLLSDGHVQNQPLTLQLVRENSCHTRLFTCGLSLTANRH
MLRALAQAGGGTCEFFDTKMKHTWAEKVRAQVQRMESPGCRSVAVKWQQFNPTAPPPVQA
PSQLHGLFSDCHTLIYGFVPHCTQATLFGDLSGNEIKTMVSTTELQKTKGTFLHKLTARA
IIRDYEDGILGNSEAEHEGKKAELKSYIIELSKEFSILSQFTSFVAIEERDQNEPDAGLT
DIPKLISEEDVDILPYMGWTEEKLMVEHIICADDVRMDSEEWRSSGSTSLILHSSARKFA
FDDDENDSEDDYEDPIEDFIMEASAALPRLCSSSSWRPSRFEGSIHGFRLDSERLCSRSS
SSDVSYSKPQPPPPPAAKISALMDAPSPVGHVLLESVEPTGGVSMSDRLPPPTAASMPLN
LQVPCYYDSVESLSSNYNLASQTDVSPIDASMDAPLPHHIRHVLLKRSMEPRSNAHWISP
RPSGGARSDRLPPPTPPPPASKGASSVPPPLHISASADSLLFETYAHGLRLALGLEGSTP
PLFAGPPPNPSLASNLFLSSIPTPPAPLFGRPSASFSTMEFPALRCLSEIQRDASTPPLF
AGPPPNPSLASNLFLSSSPTPPAPLFGRPSASFSTMEFPALRCLSEIQRDASTPPLFDGP
PFPPRLASKQDLSPTPSFAPAFFRRVDASFCGKAAGPAVFGYPTVSTPPSLPASSGFGCF
LQSTNEPLGFLGSSSSGLYEASHQKQTQLMQPKAQQLERQKLLRPQDTLTSAQCKLEATK
RAAPRFQLRTQHFTKPHDILNLSVTADKTSKPDTVAWKELFELQHEDGYWECTERLSSFL
NLDVDFFANVFLQEKGIRSFGVKAHAEILRLVATLLVLQLIRVKKLAVGQLLESLLRLKE
SQEPRPMHWEAVKRAVDWACRTDRQYPCVCSRLEIGRDWESSTRQLLGCDSPHPYSPLKP
VLERRACVSVM
NT seq
5796 nt
NT seq
+upstream
nt +downstream
nt
atgacagtgtttgaaaactgtactgtagtgttagatgtgaagaatgtcccttataaagag
aagaagaagctgagattggctcttctggataatggaggaaacgtatcttatgtcatcaac
aaagagtgctcttttgtagtcactagcagtgtgaatgacctgagcagtaaccggcagagc
agcatccagaagctccggatcccagtggttgggacgcagtatgtgtggtgctgtctggat
gaagggcatctcctgcctttgacggagcatgatttggccccacagctggcttatcccacc
tctgaattcatctcttgtccagagggaaaagtgtcgacccagatacaagaaaaagaggag
ttcaaaggtcagtctgaattcccgaagactgagatagcggctcttgagaagggcggaccc
agtcttagcaggttcagagtttacagaggcggcgaccatgagctgcctgaatttccttca
cattttcaagtggccaagtattccatttttgagagggtcaaacccaagactttgtctgtt
ttggagctgcagagtgccagaggacgaaaaggccagcagtatcgtgtgttgtcttcaatc
ttgcatgaagctgagagcgcagtggtgcaggacaagcttgtgtactgcgtgacgtctgag
gatgctgtggaagcgtatctgctgctgatgaaggagatggagacacagggattcacaagg
actcacacccttcctcctgaggttgaacacttggcgtcctacagcctgcagcagcttctg
ttggaggagaagctgaactgcagctcattatcacaggaagttggcgtctttgtggagctg
gtttggaccgaagctctcggttcccttagtgacatcctgacagtccctgtctccagaatc
agccttaatgatgtgagcagggtggagggattgttactgcaggcacaaaagactcagaaa
gaggatgaagtcaaggccctgctagaggaggtcaacactcttctacccctcagaatgatc
gaccctccttccaaacacaagcttgtgtctcagaaactagatctttgtcagctgataaga
gacattttgaatgtgagtgaagccactctgggaagcccctcgccctcgtctctgggaaag
tatcgagctctgaggtgcagcattgaggttgttccaccacaaaaccctgagtttcatgtt
gtctctcaactgcttcatgaaaggcctgttcagattcagcagatactgcgtgtaagcaga
ggggtggagcttcaaatgttttgggaggatataggcaacattaagcctctccttcactcc
actagtcccagtagttttgttggaatactgtcacgaggtctgctgctgcccagagttgga
gtcgaacagcatggaattgagaggacggatatcgggaatcttggaggaggaatctacttc
agtgactctctaaacactagtgtgaaatactccaagcccagtgtaactgacggctctcgg
ttgttgttggtgtgtgaagtggcgttgggtcggtgcaaagacctgctgaagaaagacacc
actttgacctgcgcccctgaaggctaccacagtgtacatggagtccaccgcacacccaac
agactctctgaatttgaggatgatgagtttgttgtctataacacagagcagatcagactg
aagtatgtggttcagtacactctggagggagacgagttaaaagagttccagcctcatatc
aacacagttgtggagctcacacagctcgctgacacgtctgacgtcttgtccagtgatgac
agtgagggtttggagtccactaaaaaccctctggaggagatgactgcaggtttgctggac
agcaatggtcagaaaattcctcttcaggccgtcaatgtgaggtgcaagctgatggacctg
ctgtgtcaggtcatcatttttcagacctacacaaacaagagtgctgttcccattgaagca
aagtacgtctttccactggaggagacggcagcagtgtgtggatttgaagcctttatcaat
ggaaaacacgtcgttggaaaggtaaaggaaaaagagcaggctcgtaaggagtataagcaa
gccatagagaagggccatggagcctacctgatggaccaggatgcacctgatgtattcact
atcagcgtggggaaccttcctcccggagccacagttttgatcaaggtgacgttcatcact
gagctggtggtgagatcaggctctatagtcttctcactggctggcagcgtggcaccatgg
caacagagcgccgcccttaatatgacaactcagacaactgttgaaaagattggtgtgacg
gagcttcagtcagagggggagttttctctgtctatgtccatcgaaatgccttacgagatc
atcaacttgagttcttcacaccgcatcaaaaccaagatgaccgactgtaaggcagtggtc
agcacgttaccgggacagactcttggatctgaagggttacaggtgtccttcagtctttct
aatatccacatgcccaggatgtgggtcgagaaccatccggataaatatagtcaggcctgc
atgctggtgttttatccagactttaagtcaagcggggtttccagctctggagatccgtcc
agtgtgagcgatgtggtgattctactggactcctccaagtccatgcggggagacgccatg
ctgaacgcccgcaggattgcccttcaagtcctcaaatctctggaccgctcactgaagatc
aacatcatctctttcagcactgattacaaggaagcttttcctgctccagtgcctttagat
gaagcctctgaaccagccagaaaatttattatgtcctgtagtggcgctggtggcggcact
gagctgtggcggcctctccagagcctgagcctgctgtctccctgccggggcgtgaggaac
atcctgctactctctgatggacatgttcagaaccagcctctgaccctacagctggtccga
gaaaactcctgccacacgcgcctcttcacctgtggactcagcttgacagctaatcgtcat
atgctcagagctttggctcaagcaggtggaggaacatgtgaattttttgacacaaagatg
aaacacacttgggcagagaaggtgcgcgctcaggttcagcgtatggagtctccaggctgc
agatcagtggcagtgaagtggcagcagtttaatcccacagcgcctcctcctgttcaagcc
ccctcacagcttcacggcctcttcagtgactgtcacactctcatatacggctttgtgccg
cactgcactcaggccacactgtttggagatttgagtgggaatgagatcaaaacaatggtt
tccaccacagaactacaaaagacgaaaggaactttccttcacaagttaacagcaagagcg
atcatcagagactatgaagatggcattctaggcaacagtgaagcagaacatgaggggaag
aaagcagagctgaagtcctacatcattgagctcagtaaagagttctccatcttgtcccag
ttcacaagttttgtcgccatcgaagagagggaccagaatgagcctgacgctggattgaca
gatattcctaaactcatatcagaagaggatgtggatattttgccatatatgggctggact
gaagagaagctcatggttgagcacattatttgtgctgatgatgttaggatggattcagag
gaatggcgcagtagcggctccacatctcttattctgcacagttcagctcgtaaatttgca
tttgatgatgatgaaaatgattcagaggatgactatgaggatcctattgaggattttata
atggaagcatctgcagctctccctcgtctttgctccagtagcagctggcgtccttcacgt
tttgaaggtagcattcacggtttcagattagattcagaaagattatgtagccgttcttct
agttctgatgtaagttattcaaagcctcaacccccccctccccctgccgctaagattagt
gccttaatggatgctcccagtcctgttggccatgttcttcttgagtcagtggaacctact
ggtggtgtctccatgagtgacagacttcctcctcccactgcagcctcaatgcctcttaac
cttcaagttccctgttactatgattcagtagaatctctctcctcaaattataaccttgca
tcacagacagacgtgagtcctatagatgcctcaatggatgctccccttcctcatcacatt
cgtcatgtccttcttaaaaggtcaatggaacctcgctccaacgctcactggatttctcct
cgtccttctggtggtgcccggagtgacaggcttccccctccaactccccctccccccgcc
tccaagggtgcctcctcagtgcctcctccccttcatatttctgcatcagcggactctctc
ctctttgaaacttatgcccatggccttcgcctagcgcttgggcttgaaggctcaactcct
cctctctttgcaggtcctcctccaaatcctagtcttgcttctaatctgttcttgtcttcc
atccccactcctcctgctcctctttttggcaggccgagcgcatctttttcaacgatggaa
ttccctgcccttcgctgtctctcagagatccagcgtgacgcctcaactcctcctctcttt
gcaggtcctcctccaaatcctagtcttgcttctaatctgttcttgtcttccagccccact
cctcctgctcctctttttggcaggccgagcgcatctttttcaacgatggaattccctgcc
cttcgctgtctctcagagatccagcgtgacgcctcaactcctcctctctttgacggtcct
ccttttcctcctcgtcttgcatctaagcaggacttgtctcccactcctagttttgctcct
gctttttttcgcagggtggatgcatctttttgtggcaaggcggctggccccgctgtcttt
ggttatcccacagtgtctacgccgccctctctccctgcatctagtggctttggttgtttc
cttcaaagtacgaatgagcctttgggctttcttggttcctcatcctctggactttatgaa
gcatctcatcaaaaacaaacacaactaatgcaaccaaaagcgcaacaactagaacggcaa
aaactactacggccacaagacactctgacatctgcacaatgtaagttggaagcaacaaaa
agggctgctcctcgttttcaactaaggactcaacatttcacaaaacctcatgacatcttg
aatctgtcggtcacggcagataaaacaagcaagcctgacaccgttgcctggaaggagctg
tttgagcttcaacatgaggatggatactgggagtgcactgagagactgagcagcttcctc
aacctggacgtagacttttttgccaatgtcttccttcaggagaaaggcatccgttccttt
ggtgtgaaggctcatgctgaaattctgagactggtggcgactctgctggtgctgcagctg
atccgggtgaagaagctggcagtgggacagttgctggagtctctcctccggctgaaagag
tctcaggagcccagaccaatgcactgggaggcagtgaagagggccgtggactgggcctgt
cggacagacagacagtatccgtgtgtgtgcagcaggctggagatcggccgggattgggaa
tcatctacacgtcagctgctgggctgtgattctccacacccatattcccctctcaaacct
gttctggagagacgtgcgtgtgtatcagtcatgtag
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integrated database retrieval system
