Rhinichthys klamathensis goyatoka (western speckled dace): 130083920
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Entry
130083920 CDS
T09701
Symbol
pola1
Name
(RefSeq) DNA polymerase alpha catalytic subunit isoform X1
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
130083920 (pola1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rkg03032
]
130083920 (pola1)
Enzymes [BR:
rkg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
130083920 (pola1)
DNA replication proteins [BR:
rkg03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
130083920 (pola1)
BRITE hierarchy
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DNA_pol_B_2
DUF1744
Motif
Other DBs
NCBI-GeneID:
130083920
NCBI-ProteinID:
XP_056104947
LinkDB
All DBs
Position
Unknown
AA seq
1472 aa
AA seq
DB search
MLMAPVSNPDKDMDGGDCDASDTCGIAASRSRREKKEKVGRKSALEQIKRAKKGEKVKYE
VEEFTSVYEEVDEEQYSKMVRERQDDDWIIDDDGTGYVEDGREIFDDELDDDALEKGPKS
KQGGKGGNSKKNAKKVPVGKPNSIKSMFMNSNVKKPTEKHVDLSQDDLLGDILQDLHSEK
PLLLTPPPVITLKKKKKTLGSPMNPFSVKPQNSPEVQLSKPRPVVTRIPSAEPSHRSSAH
IKPSKPATTQIKEPKTEEPEDNAIEFDEMDFDEPMEAEILEEEPVTMKAEAETTPTVKVE
PKTEPRDEMLISGLVGGMGWEKMEEGEPMETPVDVQVDSSQLPLVEGPDGDMVFRFYWLD
AFEDLYNQPGVVYLFGKVWIESAKAHVSCCVAVRNIERTMYLLPREHKVNLATGEQTDSA
VGMMDVYQEFNSLSEKFKIMKFKSKPVTKNYAFEIPDIPSQSEYLEVKYSAELPSLPSEL
KGSTFSHVFGTNTTSLEHFLLNRKIRGPCWLDVKTPQLSNQPISWSKVEAVAQKSDLISV
VKDLLPPPLVVMSISLKTVQNPKTHQNEIVSLAALIHHQFPLDKAPPRPPFQTNFCVVSK
PNDCIFPYDFKDAVRKKNGIVEIAGTERALLGFFLAKMHKIDPDVLVGHDIFGFDLEVLL
QRISVCKVPHWSKIGRLRRANMPKLGGRSGFAEKSATCGRLVCDVEISAKELIRCKSYHL
TELATQILKTERVVVPPENIRNFYSDSPHLLYLLELTWMDAKLILQIMCELNVLPLAMQI
TNIAGNVMSRTLMGGRSERNEYLLLHAFHERNFIVPDKQYFKKPQQNLAEDEDVDPGKGK
SNKTRKKAAYAGGLVLDPKIGFYDKFILLLDFNSLYPSIIQEFNICFTTVERGATNARKK
TEEDEDEIPELPDQSLEMGILPKEIRKLVERRRQVKQLMKQADLNPDLYLQYDIRQKALK
LTANSMYGCLGFSFSRFYAKPLAALVTHKGREILMHTKEMVQRMNLEVIYGDTDSIMINT
NSTNLEEVFKLGNKVKSEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALMVEPQGDGKYTT
KQELKGLDIVRRDWCDLAKECGNYVIGQILSDQNRDTIVENIQKHLIEVGEKVANSSIPL
NMFEIHKSLTKEPQDYPDKKSLPHVHVALWINSQGGKKVKAGDTVSYVICQDGSNLAASQ
RAYALEQLQKQPGLSLDTQYYLSQQVHPVVGRICEPIEGIDAVLIATWLGLDPSHFRAKQ
QQQREEEGDNFLGAPAQLTDEERYRDCERFTFTCPDCDTENIYDNVFEGTGSTLQPSLKN
CCHIPCGGSPMEYPIRISNKLQLDIRRHIRKYYSGWLLCEDQACQNRTRRLPIGFSRSGP
ICPACLRSTLRPEYSEKALYNQLSFYRYIFDWEYAINKVLSSEDKLRFKIGWKGEMEVYK
MLKDVTDNLLGTSGYSEVNLAKLFQAFISLKY
NT seq
4419 nt
NT seq
+upstream
nt +downstream
nt
atgttaatggctcctgtttcaaatcctgataaagacatggacggtggggattgtgatgca
tccgacacatgtggcattgctgcctcacgttccaggcgggagaaaaaagagaaagtgggg
cgcaagtcggctttagagcaaattaaacgagccaagaagggagagaaggttaaatatgag
gtggaggagttcaccagtgtgtatgaggaggtggatgaagagcagtactcgaaaatggtg
cgggagagacaggatgatgattggatcattgatgacgatgggacaggctatgtggaggat
ggccgagaaatctttgatgatgaattggatgatgatgcactggagaagggccctaaaagt
aaacaaggtggaaagggaggcaattcgaaaaaaaatgcgaaaaaagtgcctgtcggtaaa
cccaacagcattaaaagcatgttcatgaatagcaatgtgaagaaacctactgagaaacat
gtggatctgtctcaagatgatctgctgggagatattctgcaggacctgcactctgagaag
ccgcttttgcttactccacctccagtcattactctgaagaagaagaagaaaacactggga
tcccctatgaatccattttcagtcaaaccacagaattcacctgaagtccaactgtcaaag
cccagacctgtggtgacgcggattccttcagctgaaccttcacacaggtcttctgctcat
attaaacctagtaaacctgctaccacacagataaaggagcccaagacagaggagcctgaa
gacaatgcaattgagtttgatgagatggactttgatgagcccatggaagcagagatcctg
gaggaggagccagtgacaatgaaggctgaggctgagaccacacccactgttaaagtggag
cccaagactgagccacgagatgagatgttaatatctggactggttggtggcatgggctgg
gagaagatggaggagggggaaccaatggagactcctgtggatgtgcaggtggactcaagc
cagctcccgctggtggagggacctgatggagatatggttttccgcttttactggttggat
gcttttgaagacctgtataaccaacctggtgtggtgtacctgtttggaaaggtctggatt
gagtcagctaaagcacatgtcagctgttgtgttgctgtaaggaacatcgagaggacgatg
tatctccttcctcgagaacataaagttaatctggcaacaggcgagcagacggacagtgcg
gtaggaatgatggatgtgtaccaagagttcaacagtctctctgagaagttcaaaatcatg
aagtttaagtccaagccggtgaccaagaattatgcttttgagatcccagatatcccttca
cagagcgagtaccttgaagtcaaatactccgctgagcttccttcattgccatcggagctg
aagggctcaacattttcccatgtgtttggcaccaacaccaccagtttggaacacttcctc
cttaataggaagatccggggaccttgctggcttgatgtgaagacccctcagctgagcaat
cagcctattagctggtctaaggtggaggctgttgcacagaagagtgacctgatctcagta
gttaaagacctgctaccacctcctctggtcgtcatgtccataagcctcaagactgtgcag
aacccaaagacccaccagaatgagattgtttccctcgctgccctcattcatcatcaattt
cctctggacaaagctccaccacggccccctttccagaccaatttctgtgtggtgagcaag
cccaacgactgtatcttcccatatgattttaaagatgcggtcaggaaaaagaacgggata
gtggagattgccggtacagagcgtgcacttttgggtttcttcttggccaagatgcacaag
attgatccagatgttttagtgggccatgacatctttggttttgaccttgaagtgctcctg
cagaggatcagtgtgtgcaaagtgcctcactggtcaaagattggccgtctaagaagagcc
aacatgcccaaactggggggtcgcagtggctttgctgagaagagtgccacttgtggacgc
ctggtctgtgatgttgagatctctgccaaagagctgatcaggtgtaagagttatcacctg
actgagctggctacccagatcttaaagacagagagggttgtggtgccaccagagaacatc
aggaacttctacagtgattccccgcacttactctaccttttggagctcacctggatggat
gctaagctgattctgcaaataatgtgcgagctgaacgtgctgcctctcgcaatgcagatc
actaacattgccggtaacgtcatgtctcgtactttgatgggtggacgctctgaaaggaac
gagtacctactgctccatgctttccatgagaggaacttcattgttccagacaagcagtac
ttcaagaagccacaacaaaatctggctgaggatgaggatgttgacccagggaaaggcaaa
tccaacaaaacgaggaagaaggcagcttatgctggaggtctggtgctggacccaaaaatt
ggtttctatgataagttcattctgctgttggacttcaacagcttgtatccctccatcatt
caggagttcaacatctgctttactaccgttgagagaggagcgaccaatgcacgcaagaaa
actgaggaggatgaagatgaaattcccgagctgccagatcagagtctggagatgggcatt
cttcccaaagaaattcgaaaactggtggagcgccgacgacaggtcaaacagctaatgaag
caagcggacctcaaccctgacctgtacttgcagtatgatatcaggcagaaggcccttaag
ctgacagctaacagcatgtacggatgccttggcttttccttcagtcgcttttacgccaag
cctttggctgcattggtcactcataaaggaagagagattttgatgcacaccaaagaaatg
gtgcagaggatgaatctggaggtcatatatggggataccgactccatcatgatcaacacc
aacagcaccaacctggaggaggtcttcaaactgggaaacaaggtgaaaagtgaggtgaat
aaactctataaactcctggagattgacatcgatggcgtgtttaagtctcttctgctgctg
aagaagaagaaatacgcagcactgatggttgagccgcagggagatggcaaatacactacc
aaacaagagctcaaaggcctggacattgtgcgcagagactggtgtgacctagccaaggag
tgtggcaattatgtgattggtcagattctgtcagaccagaaccgtgacaccattgttgag
aacattcagaaacatctgattgaggttggagagaaggtggccaatagcagtatcccactc
aacatgttcgagatacacaagtcccttacaaaggaacctcaggactaccctgacaagaag
agtctcccccacgtccatgttgccctctggatcaactctcagggtgggaagaaggttaaa
gcgggtgacactgtttcttatgtcatctgtcaggacggttcaaacctggcagccagtcag
agggcgtatgccctggaacagcttcagaaacagccgggactcagcctggacacgcagtac
tacctgtcccagcaggtgcaccctgtggtgggccgaatctgtgagcctatcgaaggcatt
gatgcagtgctaattgctacttggctaggactcgacccaagtcacttccgagccaaacag
cagcagcaacgtgaggaagaaggtgacaattttcttggtgctccggcccagctcactgac
gaagagcgctaccgtgattgcgagaggtttactttcacttgccctgactgtgataccgaa
aacatctacgacaatgtgtttgaggggacggggagcaccttgcagcccagcctcaagaat
tgctgccacatcccctgtgggggcagcccgatggaatatcccattcgtattagcaacaaa
ctgcaattggacattcgccggcacatcaggaaatactacagtggttggctgctgtgtgag
gatcaggcctgccagaaccgaacccgccgactgcccattgggttctcgaggtctggacca
atctgtccagcctgtctcagatccacactgaggcctgagtattcagagaaagccctctac
aaccaactgagcttctacagatacatctttgactgggaatatgccatcaacaaggtcctg
tcgtctgaggataaattgagattcaagattggctggaaaggagaaatggaagtgtacaaa
atgctgaaggatgtaacagacaacctcctcggcaccagcggatactctgaggtcaacctt
gccaaacttttccaggccttcatatccctcaagtactga
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integrated database retrieval system
