Rhinichthys klamathensis goyatoka (western speckled dace): 130084936
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Entry
130084936 CDS
T09701
Symbol
grin2bb
Name
(RefSeq) glutamate receptor, ionotropic, N-methyl D-aspartate 2B, genome duplicate b isoform X1
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04020
Calcium signaling pathway
rkg04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
130084936 (grin2bb)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130084936 (grin2bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rkg04040
]
130084936 (grin2bb)
Ion channels [BR:
rkg04040
]
Ligand-gated channels
Glutamate (ionotropic)
130084936 (grin2bb)
BRITE hierarchy
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
130084936
NCBI-ProteinID:
XP_056106458
LinkDB
All DBs
Position
Unknown
AA seq
1773 aa
AA seq
DB search
MGVGLAMFKGLYLHSSAMLVSLHLSSSPFSDRRVLSLVSLASSSKPTLSLSLLLLSLFFF
PTCESRRGGGIGTPGGERGQSIISPPHYPPPGVNPVGPPLPPKFAQGLSIAVILVGNSSE
VSLSEGLEKEDFLHVPLSPKVELVTMNETDPKSIINRICALMSRNWLQGVVFGDDTDQEA
IAQILDFISAQTHIPILGIRGGSSMIMAAKDDHSMFFQFGPSIEQQASVMLNIMEEYDWY
IFSIVTTYYPGYQDFVNRIRSTVENSFVGWELEEVLLLDMSVDDGDSKIQNQMKKLQSPV
ILLYCTKEEATTIFEVAHSVGLTGYGYTWIVPSLVTGDADNVPNVFPTGLISVSYDEWDY
GLEARVRDAVAIIAMATSTMMLDRGPHTLLKSGCHGTPDKKGSKSGNPNEVLRYLMNVTF
EGRNLSFSEDGFQMHPKLVIILLDKERQYDRVGKWENGSLTMKYHVWPRFELYSDAGERE
DDHLSIVTLEEAPFVIVEDVDPLSGTCMRNTVPCRKQLKLQNQTKDSGIYIKRCCKGFCI
DILKKIAKSVKFTYDLYLVTNGKHGKKINGTWNGMVGEVVLKNAHMAVGSLTINEERSEV
IDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVFEYFSP
VGYNRCLADGREPGGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIF
LASYTANLAAFMIQEEYVDQVTGLSDKKFQHPNDFSPPFRFGTVPNGSTERNIRNNYKEM
HSYMTSFHQKNVNEALHSLKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGYIFATTGY
GIAIQKDSGWKRAVDLAILMLFGDGEMEELEALWLTGICHNEKNEVMSSQLDVDNMAGVF
YMLGAAMALSLITFIAEHLFYWQLRFCFMGVCSGKPGATFSISRGIYSCIHGVQIEENKS
ALDSPSATMNMNMNNTHSNILRLLRTAKNMTSVPGVNGSPLSALDYSHRESAVYDISEHR
RSLVGHTDCKPPPYLPEDNMFSDYVSEVERTFGNLHLKDSNLYQDHYLHHHGGTGSELAL
GMSGPLPNRPRSLGSASSLEGGYDCDSLGGGVAPIFTTQPRQSLTHRNREKFDLIAGHPT
QSSFKSGLPDLYGKFSFKGGASSSGFIAGHDRYCGGGGVGSGGDDGNIRSDVSDISTHTV
TYGNLEGHGKRRKQYRDSLKKRPASAKSRREQDEIELGFRRRPHHTIHHHHHHPATQAHR
SATPPVERKSQRGGNGTSYLFRDKDNLRDFYVDQFRAKEGASPWEHLDLSDAPGMGGGVG
LGGGGCGGVVSSGGAGGACTSLVPIEDFLKGKSKKTECKGGMGGGSPGQQGHACWEKGIG
GVGGLAGGDWECRNCHSGGVGSGGSKPVCMHGGGGAGAYPAAGGVGGSSGGSGQISSRPS
SASCKRCDSCKKPGNLYDISEDNHLLLDQIGGKHPLESGKGGGGTGAQTQVQRRKFGPGG
KVLRRQHSYDTFVELQKEGAGRMGGFGGSGGASMLPPPRSVSLKDKDRYMEGASPYAQMF
EQYAGGERETTYFGDRGKGGGSSFSLFRGGEGGLHRRSVGERDMRDRDRGMMGGGVGGTR
GVGTYSLSKSLYPDKVNQNPFIPTFGDDQCLLHGAKSYYIKKQQTQPQQQQTPQQQQQQQ
LLNNNRADFRGSMGVTSYLPASATSGVLSNVAPRFPKELCLGGPLGNHHGGGPSNNKLLS
ARDGLGMGQGQRPFNGSSNGHVYEKLSSIESDV
NT seq
5322 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgggctggcaatgttcaagggactgtatcttcactcctccgccatgcttgtc
agcctccacctctcctcttcccctttctccgaccgtcgcgtcctgtctttggtctccctc
gcttcctcttccaaaccgaccctctccctctcgctgcttctcctctctctcttcttcttc
cccacctgcgagtctcgccgtggaggcgggatcgggacgcccggcggagagcgaggccaa
tcgatcatcagccctcctcattatcctccaccaggagtcaatccagtgggtcctcccttg
ccaccaaagtttgctcaaggccttagcatcgcagtgatccttgtgggaaactccagcgag
gtgtctctctctgaaggtctggagaaagaggacttcctacacgtgcctctctctcccaaa
gtcgagctggtcacaatgaacgaaacagaccccaagagtatcataaaccgcatctgtgct
ctaatgtcacggaactggctccagggcgtggtgtttggggacgataccgaccaggaggcc
atcgcccagatattggacttcatctcggctcagacgcacatccccatcctgggcatccgc
ggaggctcttccatgatcatggccgccaaggatgaccattccatgttcttccagtttggt
ccctctatagagcagcaagcctctgtcatgcttaacataatggaggaatatgactggtac
atattctccatcgtcaccacctactatcctggataccaggactttgtaaatcggatccgg
agtaccgttgagaacagttttgttggctgggagctggaagaagtgctgctgttggacatg
tcagtcgacgatggcgactcaaagatccagaaccagatgaagaagctccaaagtcctgtt
atactactgtactgcactaaagaagaagccacaaccattttcgaggtggcacattctgtc
ggcctcactggttacggttacacctggattgtaccatctctggtgacaggggatgcagat
aatgtacccaacgtctttccaacaggtttgatctctgtttcctacgatgagtgggactac
gggctggaggctcgggtgcgtgatgctgtagccataatcgccatggcaacctccacaatg
atgctggatcggggtcctcacacgctgcttaagtctggatgccacggcacacctgacaag
aaaggcagcaagtcaggaaaccccaacgaggtgctgaggtatctcatgaatgtgacattt
gaagggcgcaacctctcctttagtgaggacggttttcagatgcacccaaagttggttatt
atactgttagataaggagaggcagtatgacagggtcggtaaatgggagaacgggtctctg
acaatgaagtaccacgtgtggcctcggttcgagctgtactcggatgctggggagcgagag
gatgaccacctgtccattgttacgctggaggaggctccatttgttattgtggaggatgtc
gaccccctcagtggcacctgcatgaggaatacagtgccgtgcagaaaacagctcaaactc
caaaatcagacaaaagattcagggatctacattaaacgctgttgcaagggcttctgtata
gacatcctcaaaaagattgcaaagtctgtaaaattcacctacgatctctacctggtgacc
aatgggaagcatggcaaaaagatcaacggcacatggaatggcatggttggagaggtggtg
cttaagaatgcccacatggcagtggggtccctgaccataaatgaagagaggtcggaggtc
attgacttctctgtgcccttcatagagacaggaattagtgtcatggtctctcgtagcaat
ggcacagtgtctccttctgcctttttagagcccttcagcgctgatgtctgggtaatgatg
ttcgttatgctgttgatagtttcagccgtggctgtcttcgtctttgagtacttcagtcct
gttggctataatcgctgcttggcagatggacgagagcctggcggtccctccttcaccatt
ggaaaagctatttggctactttggggtttggtcttcaataactctgtgcccgtgcagaac
cccaaaggcactactagcaagatcatggtatcggtctgggccttcttcgctgtgattttc
ctggccagctacactgccaacctggccgcgtttatgattcaagaggaatatgtggaccag
gtgactggcctgagtgataaaaagtttcaacatccgaatgacttttcccctccgttccgg
ttcggtactgtgcccaatggcagcacagagagaaacataaggaataactacaaggagatg
cacagctatatgaccagcttccaccagaaaaacgtaaacgaggcgctccacagcctgaag
acgggtaaattggatgcatttatctacgatgcagcggtcttgaactacatggccggacgc
gatgagggctgtaaactggtgaccattggcagtggttatatctttgccactacagggtat
ggcattgccattcagaaagactcaggctggaagagggcagtggacctcgccattctgatg
ctttttggagatggtgagatggaggaacttgaggccctgtggctgactggcatctgccac
aatgagaaaaatgaggtgatgagcagtcagctggatgtagacaacatggcaggtgtgttc
tatatgctgggagctgcaatggccctgtcccttatcacattcatcgcagagcacctcttc
tactggcaactgcgattctgcttcatgggtgtgtgctcgggcaagcccggcgccaccttc
tccatcagcaggggcatctacagttgcatccatggtgttcagattgaagagaacaaatca
gcccttgactcaccatcagccactatgaacatgaacatgaacaacacccactccaacatt
cttcgtttgttgcgtactgccaaaaacatgacctctgtgcctggggtcaatggttcaccc
ctcagcgcattggactacagccatcgtgagtcagccgtttatgacatcagtgaacaccgg
cgcagcctagtaggccacacagactgcaagcctccaccgtacctgccagaggacaacatg
ttcagcgactatgtaagcgaggtggagaggacttttgggaacttgcacctgaaggacagc
aacctgtaccaggatcattacctacaccaccatgggggcacgggatccgaactggctctc
ggtatgtcgggtcccctgcctaaccgacctcgtagcttagggagtgccagttcattggag
ggtgggtacgattgtgacagcttagggggaggggtagcgcccatcttcaccacccagcca
cggcagtcgctgacacatcggaacagggaaaagtttgacctgattgcaggtcacccaacc
cagtcaagcttcaagtctggcctgcctgatctatacggaaagttctccttcaagggtggg
gcatccagttcaggttttatagcaggacatgacaggtactgtgggggaggtggggtggga
tcgggaggggatgatggaaacattcgatccgacgtgtctgatatttccactcacaccgtg
acctacgggaacctcgaagggcacggcaaacggcgcaagcagtacagggacagcctaaaa
aagagacccgcttctgccaagtctcgccgtgagcaggatgagattgagcttggattcagg
agacgcccccaccacactatccatcatcaccaccatcatccagcaacacaagcacaccgc
tcagccaccccacccgtggagcgcaagagccagagaggtggtaacggcacctcctatctg
ttcagagacaaagataatttgagggacttctatgtggatcagtttcgagccaaggaaggg
gcatctccatgggaacatttggatttaagtgatgctccaggaatgggtggaggagtggga
ctgggcggaggtggttgcggtggagtagttagtagcggtggtgctgggggagcgtgcact
agtttggttcccattgaagatttcctgaaaggtaaatctaagaagacagaatgtaagggt
ggaatgggaggaggatcacctgggcaacagggccatgcatgctgggaaaagggcatcgga
ggggtgggagggttggctggaggggattgggaatgtcgcaattgccacagtggaggggtt
ggaagtggaggaagcaagccagtttgcatgcatgggggaggcggggccggggcctatcca
gctgctgggggagttgggggatccagtggtgggagtggacaaatctcaagtcgccctagt
tccgcctcctgcaagcggtgtgattcgtgcaagaaaccgggcaacttatatgacatcagt
gaggacaaccacctcctcttggatcaaattgggggcaagcaccctctggagagcggaaag
ggagggggaggcacaggggcccaaacccaggtacagaggcggaaatttggcccaggtggt
aaggttttgcgcaggcagcactcttatgacacgtttgtagagctgcagaaggaaggggcg
ggcaggatgggtgggtttggaggcagtggtggagcgtcaatgcttcctccaccccgaagc
gtgagcctaaaagacaaagaccgctacatggagggcgcaagcccctacgcccagatgttt
gagcagtatgcgggaggggagcgggagacaacatattttggggacagagggaagggtggg
ggttcatcatttagcttatttcgtgggggtgaaggtgggttgcaccgtcgctccgtgggt
gagagagacatgagggacagggatagaggcatgatgggaggaggtgtgggcggtacccga
ggggtcgggacttactccttgtctaaatctctctacccagataaggtgaaccagaaccca
ttcatcccaaccttcggcgacgaccagtgtctattacacggcgccaaatcatactacatc
aaaaagcagcagacacagccgcagcagcaacagacgccacaacagcagcagcagcaacag
ctcctcaacaacaatcgggctgacttccggggctccatgggggtgacttcctatttgcct
gcttccgcaacttctggggtgctgtccaatgtggcccctcgcttccccaaggagctatgt
ctgggcgggcctcttggcaaccaccacggtggaggacctagcaacaacaagctgctgtca
gcaagggatgggttaggaatgggtcaaggacagagaccgtttaatggatcgagcaacgga
catgtttatgagaagctttccagtatagagtctgatgtctga
DBGET
integrated database retrieval system
