Rhinichthys klamathensis goyatoka (western speckled dace): 130094986
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Entry
130094986 CDS
T09701
Symbol
cacna1ha
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04010
MAPK signaling pathway
rkg04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130094986 (cacna1ha)
04020 Calcium signaling pathway
130094986 (cacna1ha)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rkg04040
]
130094986 (cacna1ha)
Ion channels [BR:
rkg04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
130094986 (cacna1ha)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
130094986
NCBI-ProteinID:
XP_056117585
LinkDB
All DBs
Position
Unknown
AA seq
2209 aa
AA seq
DB search
MLVILLNCVTLGMFQPCEDLKCQSEWCIILQAFDDCIFAFFAVEMVIKMIALGIFGSKCY
LGDTWNRLDFFIVMAGMMEYSLDGHNASLSAIRTVRVLRPLRAINRVPSMRILVTLLLDT
LPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFMPADVKTLYNLSFMSPYYMNEDGED
NPFICSANKENGMLRCSEVPRLKEGVECTLNASPPGHAYSGLDGTSKNSCVNWNQYYSVC
EAGELNPHKGAVNFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGS
FFMINLCLVVIATQFSETKQRENQLMQEQRACYLSNDSTLASYSEPGSCYEEMLRYISHL
YRKVKRRASRIYNNWQSKRRKKVNPNSVLSGGGGTGGGVNGHSRHRGGGNWVRSIHNLIQ
QHQRQHCHLSNGSPSPVVSTGCGEALEMRSIATGPQLTVSSQPTGMHNLSSRTQSVHSIY
QGDFHEAPQGRTSATVGVPALGRLNGGMNYPTILPSLICSYTGSSSAGKGRGESDANTGC
EAIDPFEKLHQLMGEHSHSRVLLQIAGVVPTQLLLELLSCPYCSRALETMDLELGDSDYS
RSEGDVVYEFSHGAEFKPSRVFHHKILEKRNRLAQFWEDFRDRLTRIVDSKYFNQGIMIA
ILINTLSMGIEHHEQPTQLTNILEISNIVFTSMFVLEMLFKLLAFGTFGYIKNPYNIFDG
IIVVISVWEIIGQADGGLSVLRTFRLLRVLKLVRFLPALRRQLVVLMKTMDNVATFCMLL
MLFIFTFSILGMHLFGCKFSQKMENGDTIPDRKNFDSLLWAIVTVFQILTQEDWNVVLYN
GMASTSPWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSDADEEKRSVNFEEEE
KMGELRASELKMYSLMMSANGHVDPRGTLPPPIIMRTAATPMPTPKSSLGPESVFSLTES
RRGSGISIDPNAFDQKSLTSPRRSPCHPRGSGSNWGSRRSSWNSLGRAPSLKRKDTSGEK
ESLLSGEGRGSFEDEDLEGEKLANISGGSLQYPSSLDIPELPQTPSFSSLGEYHDCNGRS
LHVPTDLYTSLSKEDSITEEDMDDSFCLRLKRTLEAYKPKWCKDHDDWSLYLFSPQNKFR
MMCQRLISHKMFDHVVLVFIFLNCITIALERPTIQPSERKFLSISNYVFTVIFVAEMTVK
VVALGFCSGKHSYLQSTWNVLDGVLVFVSLIDILVSMASTGTNRIFGILRVLRLLRTLRP
LRVISRAPGLKLVVETLITSLRPIGNIVLICCAFFIVFGILGVQLFKGKFYHCEGGDTKN
ITNRSDCRDAKYKWIRRKYNFDNLGQALMSLFVLSCKDGWVNIMYDGLDAVGVDQQPERN
HNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQDQEEEEARLREEKRQKLLEKKRR
SKENCGSEAQQRPYYADYSPARLYIHTLCTNHYLDLFITCIIGINVVTMSIEHFNQPRYL
EEALKYCNYVFTVIFIIEALLKLVAFGVRRFFKDRWNQLDLAIVLLSIMGITLEEIKMNA
ALPINPTIIRIMRVLRIARVLKLLKMATGMRALLDTVMQALPQVGNLGLLFMLLFFIYAA
LGVELFGKLECSDDDPCEGLSRHATFENFGMAFLTLFRVSTGDNWNGIMKDTLRECPKED
YCYLPLVSPIYFVTFVLMAQFVLVNVVVAVLMKHLEESNKEAKEDAEMDAEIEMEMKMAR
RLSNVSAGSSSGPEGRATYVGPHPDSPKQEEGMQKTQENLLSPRKMSVSRMHSLPNDSYM
FRPVRPASAPYPLEEVETSQGYLELGSITSVHSQPCESRSLLQVPGVPPHSQFSCLPKIP
PPISSPTHSIGRTLCRQEAIKNDSIDVQSFDSKDNLERQAGITTGSFKLHFPRIPGPSIP
QESPLLPPRGHAPSVRTFQQPYSQHNIPSRPPSLASSSRSISPSGSMFDSADPTDEEVRH
INSTARLWAGVQAEARSHSLSPYATSGTLLPILVKNCSSAANLGELSVKDPKKCFGVDTE
GFLAKPYGADDHRRHSIEICSLVDDGLFGQELSEKRHVPMRGQSLHIPRKKKMSPPCISI
EPPFETETPASLASMKKLSESSMLLRRRTPSYELALQRDSLDMPENQLSTQPLIKVERHP
SHCAEYLSLPHPAPMGSLAGILCENTQPPPFDSRFEESTDFGSVNRTAQ
NT seq
6630 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgattctgttgaactgtgtgactctgggcatgttccagccatgtgaggacctc
aagtgccagtctgagtggtgtatcatcttgcaggcatttgatgactgcatctttgccttc
tttgctgtggagatggtcatcaaaatgatagcccttgggatttttggatcaaagtgttat
cttggcgacacatggaatcggctggacttcttcattgtcatggcagggatgatggagtat
tcactggacggtcataacgccagcctgtcagccatccggactgtgcgagtgctcaggccc
ctgcgagccatcaacagagtgcctagtatgagaatactggtgactctgcttcttgatact
ctgcctatgttaggcaacgtcctcctgctgtgcttttttgtcttctttatattcggcatt
gtcggggtgcagctgtgggctggacttcttaggaatcggtgtttcatgccagctgacgtg
aaaaccctttataatctgtcattcatgagtccatactacatgaatgaagacggtgaggac
aaccccttcatctgctccgccaataaggagaacggcatgctgcgctgcagtgaggtgccc
cgcctcaaggagggtgttgagtgcactttaaatgcatctccaccgggacatgcctactcg
ggcctggatgggaccagcaaaaacagctgtgttaactggaaccagtattacagtgtgtgt
gaggccggggagctcaacccgcacaaaggggcagtgaactttgataatattggatatgcc
tggattgcgatattccaggttattactttggaaggatgggtggacatcatgtattacgtt
atggatgcccactccttttacaattttatatattttatattgcttattatagtgggttcc
ttcttcatgatcaacctgtgcctggttgtaatagcaacccagttctcagaaacaaagcag
cgtgagaaccagctgatgcaggagcagcgagcatgctacctctccaacgacagcaccctt
gccagctactctgagccggggagctgctacgaggagatgctcaggtacatcagccacctg
taccgcaaggtgaagcgccgcgcttcccgcatctacaacaactggcagagcaagcgcaga
aagaaggtgaaccccaacagcgtgctgagtggaggaggaggcactggcggcggggtcaac
ggtcacagcaggcacaggggtggcgggaactgggtccgttccatccacaacctcatccaa
cagcaccaacgacagcactgtcacctcagcaatggcagccccagtcctgtggtctctact
gggtgcggcgaggctctggaaatgaggtctatcgcaacggggccgcaactgactgtgtcc
tctcagccaaccggcatgcacaatctttcttccaggactcagtcagtgcacagcatttat
caaggtgactttcacgaggccccacaagggcgaacgagcgccacggtgggcgtgccggca
ctcggacgactaaacgggggcatgaactatccaaccatcttgccctccctcatctgcagc
tatacaggcagcagttctgcagggaaagggagaggggaatcggatgcaaatacaggatgt
gaagcgattgatccctttgagaagctgcaccagctcatgggagaacatagccacagtcgt
gtgctgttgcagatagctggtgtggtgcccactcagttgcttcttgagctcctgagttgc
ccgtattgctcaagggccctggagaccatggatctggagctcggtgattcagactactcc
agatcagaaggggacgtggtgtacgagttctcccatggagcagagttcaaacccagccgt
gtattccatcataaaatactggagaagcgtaaccgcctggctcagttctgggaggacttc
cgagaccgattgacacgcatagtggatagcaaatacttcaatcaaggaattatgattgcc
atccttatcaacaccttgagtatggggattgaacaccatgagcagcccacgcagctgacg
aatattctggagatcagcaacatcgtcttcactagcatgtttgtccttgaaatgcttttc
aaactcctggcctttggtaccttcggctatatcaagaacccctacaacatctttgatggg
attattgtagtcataagtgtgtgggagatcatagggcaggcggatgggggtctttcagtg
ctgaggacgtttcgtctcctgcgtgtactcaaactggtgcgcttcctccctgcactgcgc
agacagctggtggtgctgatgaagaccatggacaatgtggcaacattctgcatgctgctc
atgcttttcatcttcacattcagcattcttggaatgcatctgttcggatgcaaattcagc
cagaagatggagaatggagacaccattcctgacaggaaaaactttgattccttgctgtgg
gccattgtcactgtgtttcagattctgactcaggaagactggaacgtggtcctttataat
ggaatggcttccacttccccatgggcggctctttactttgtggctctgatgacttttggg
aattatgtcctctttaacctgcttgtggccatcttagtggaggggtttcaggcagaggga
gatgctaataggtcagatgcggatgaagagaagcgatctgtgaactttgaagaggaggag
aagatgggggaattacgagcttcagagttgaagatgtactctctgatgatgtcagcgaat
ggacatgtggatcctcgtggcactttgccccctccaatcatcatgcgcactgctgccacg
cccatgcccaccccaaagagctctcttggcccggaatcagtgtttagtttgactgagtcc
aggcggggcagtgggatctcgatagatccaaacgcttttgatcagaaatccctgactagc
ccaagaagatctccgtgccatccccgtggctcaggcagtaactggggcagccgcagatcc
agctggaacagtttaggacgggcgccgagtttgaaaaggaaggacacgtctggggagaag
gagtctctgctgtctggggaaggcaggggtagttttgaggatgaggacctagagggtgag
aaactggccaatatcagtgggggctcactgcaatatcctagctctctagatatccctgag
ctgccccagacccccagcttcagctctttgggagaataccacgactgcaatggaagaagc
ctgcacgtacccactgacctgtacaccagcctgagcaaagaagactccattacagaggag
gacatggatgatagtttctgtctgcgtctcaagaggacattggaagcatataaacctaag
tggtgtaaagatcatgacgactggtccctttatctgttctctcctcagaacaagtttcgg
atgatgtgccaaaggttaatttctcacaagatgtttgatcatgtagtcttggtattcatc
ttcttaaactgcatcactattgctctggaaagacccactatccagccatctgagcgaaag
tttctcagtatctccaattatgttttcactgtgatctttgttgctgaaatgactgtgaag
gtggtggcccttggcttctgctccgggaagcacagttatctgcagagcacctggaatgtt
ctggatggggtgctggtctttgtctctctcattgacattctggtctctatggcttccact
ggtacaaaccgaatctttggcatcctgagggttcttcgcctgctgagaactctgcggcca
ctgagagtgattagtcgtgctcctggactcaagctggtggtggaaacgctaataacgtct
ctgaggcccattgggaacattgtgctgatctgctgtgccttctttattgtctttggaatt
cttggagttcagctcttcaaaggaaagttttaccattgtgaaggtggcgacaccaaaaac
atcaccaataggtctgattgtcgtgatgcaaagtacaaatggattcgaagaaagtacaac
tttgataacttgggacaggctctcatgtcactgttcgtgctctcctgtaaggatggatgg
gtcaatataatgtatgacgggttggacgctgtcggggtggaccagcagcctgagcgcaat
cacaacccctggatgctcctctacttcatctctttcctgctgatcgtcagcttttttgtg
ctgaacatgtttgtgggagtggttgtggagaacttccacaagtgtcgtcaggaccaggag
gaagaggaggcgcgcctgcgcgaggagaagaggcagaaactgctggagaaaaagcgcagg
agtaaggagaattgcgggtctgaggcccagcaaagaccgtactatgcagattactctcca
gcccggctctacatccacacactgtgtaccaaccactacctggacctctttatcacctgc
atcatcggcatcaatgtggtcactatgtctatcgagcatttcaatcagcctcggtacctt
gaagaggcattgaaatactgtaactatgtctttaccgtcatcttcataattgaggctttg
ctcaaacttgtggcatttggtgttcggagattcttcaaagacagatggaaccagctggat
ctagccatagtcttgctctctatcatgggcatcacactggaggagatcaagatgaatgca
gcactgccaatcaaccccaccatcatccgcattatgagggtgctgagaatagctagagta
ctgaagcttttgaagatggctacaggtatgagagccctgctggacacagtaatgcaagct
ttaccacaggtgggaaatctgggcttgctgtttatgctcctcttcttcatttatgcggca
cttggtgtggagctttttgggaaactagaatgctctgacgacgacccatgtgaaggatta
agtcgccatgctacgtttgagaactttggaatggcctttttaacgttattcagagtatcg
acgggggacaactggaatggcataatgaaggacactctgcgagagtgccctaaagaggac
tactgctatctgcctctggtctcccccatctacttcgtcacctttgtactgatggctcag
tttgtgctggtgaacgtggtggtggctgtattgatgaaacacctggaggagagcaataag
gaggctaaagaagatgcagaaatggacgctgagattgagatggagatgaaaatggctcgg
cgtctcagcaacgtctcagcagggagttcttcagggcctgaaggcagggcaacttatgta
ggaccacacccagattcacccaaacaggaggaggggatgcaaaaaacacaggagaatttg
ctgtctccacggaaaatgtcagtgtcaaggatgcactctttgcccaatgacagctacatg
tttcgccctgtgaggccagccagtgctccatatccactagaagaagtggagaccagtcaa
gggtaccttgaattaggctccatcacctcagtccactcccagccatgtgaaagccgttcc
ctgcttcaggtccctggtgttcctccccattcccaattcagctgcctccccaagataccc
cctcccatttcctctccaacccacagcattggcaggactttatgcagacaggaagcaatt
aaaaacgactccatcgacgtgcaaagttttgactccaaagacaatcttgaaagacaggca
gggataaccacaggcagctttaagctgcattttcctcggatccctggccctagcattcct
caggagtcacccttgctgcccccacgtggacatgcacccagtgtccgcaccttccagcag
ccctatagccagcacaatatcccttctcgacctcccagcctggccagcagcagcagaagc
atcagccccagtggctccatgtttgactctgctgatccgaccgacgaggaggtccgccac
atcaacagtacagcacgactgtgggcaggggtccaggcagaagcacggagtcactccctg
tctccttacgccacctcagggacgctgcttcccatcctcgtgaagaactgcagcagtgct
gccaacttaggcgagttaagcgtcaaagacccgaagaagtgcttcggtgtggacactgag
ggttttctggcaaaaccctacggtgccgatgaccatcgcaggcactcaattgagatttgc
tctttagtagatgatgggctgtttggtcaagaactcagcgaaaagaggcacgttccgatg
cgcggacaatcgttgcacattccccggaagaaaaagatgagccctccctgtatctccatc
gagcctccatttgaaacggagacccctgcctctcttgcatccatgaaaaagctgtcagag
agcagcatgctactgcggaggaggacgccatcctatgaactggccctgcagcgggactct
ctagatatgccggagaaccagctgtctacccagccgctcatcaaagtagagcggcacccc
tctcactgtgccgagtatctgtccctgccacaccccgccccaatgggcagtctggcaggc
attctgtgtgaaaacacacagccacccccctttgatagcagatttgaagaatccacggac
ttcggctctgtaaacaggacagcccaatga
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integrated database retrieval system
