Rhinichthys klamathensis goyatoka (western speckled dace): 130096860
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Entry
130096860 CDS
T09701
Symbol
grin2ab
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04020
Calcium signaling pathway
rkg04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
130096860 (grin2ab)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130096860 (grin2ab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rkg04040
]
130096860 (grin2ab)
Ion channels [BR:
rkg04040
]
Ligand-gated channels
Glutamate (ionotropic)
130096860 (grin2ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
130096860
NCBI-ProteinID:
XP_056119517
LinkDB
All DBs
Position
Unknown
AA seq
1446 aa
AA seq
DB search
MMGAIVWLMVLWALLGWSQAAEKPPSLSVAVILGQTPTVSESALRPARGIGAPLDVTVLS
VQVNQTDPGSMLTHLCELMSRQRLHGLVYGDGTDQEAVAQMLDFVSSQTSMPILGIHGGS
AMTMAEKDASSSFFQFGASLQQEALLMLAIMEEYDWHIFSVVTTKFPGFQEFIATVRVTV
DHSFIRWDLQGVVTLDGVGEPEDRAHVQLKRIQSPVILLYCSKDEAALVMDEARSLGLTG
AGFVWIVPSLTTGNIEQTPEAFPMGMISVAYDEWDYPLEKRVQDAVGIISSAAAAMFREE
GRIPDGTASCYGQSEKPEVPASALRRYMMGVNLGGKDHSFMDDGYQVNPKLVVIVLNTQR
EWEKMGRWENHTLKLKFPVWPRYNSFGDADADENHLSIVTLEERPFVIVDDVDILTGTCN
RNSVPCRKHIKDNSTDGSYVKKCCKGFCIDILKKIARNVKFTYDLYLVSNGKHGKKINNV
WNGMVGEVYNKKAIMAVGSLTINEERSEVIDFSVPFVETGISVMVSRSNGTVSPSAFLEP
FSASVWVMMFVMLLIVTAIAVFLFEFISPLGFNRNLAQGKDPHGPSFTIGKAVWLLWGLV
FNNSVPVQNPRGTTSKFIVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVTGLSDRKFQS
PYSYSPPFRFGTVPNGSTERNIRKNYPDMHQYMVKYHQTGVQDALVSLKTGKLDAFIYDA
AVLNYMAGRDDGCKLVTIGSGYIFATTGYGIALQKGSYWKRHVDLAILGIIGDGEMEELE
AQWLTGICHNEKNEVMSSQLDVDNMAGVFYMLAAAMALSLITFVWEHLFYWRLRYCFTGL
CSGRPGILFTISRGIWSCIHGVHIEMKKAPELGFSPQANMLHLLKSAKEITTLGVTSPKR
PGSSILPPTQGLLEIMGGGKGNNLTQKNAPFSNTSTMLSNRHKEPLNNTLLPGQRALSLT
DAQPGVAGNGGSGGGGETIRPPASKPRALWKKSVETLRQNPEPGGNSPPSAPQPTETLPM
KSQRYLPEDAPTRSDMSDCSGRVDLQKQHKLKETVRKRNRLPRDLSDLELSTLRSQPSQQ
SNHSAQMYSQSSQGSQIYTIDSIDQEHGLHYPDIFSDHRDTKHRPPSSSEQQPILQLNSS
LLSQAHEPDVMQTAVAKDKKYNTYGKSGGAGSIAGGSGSTQDPRQTHCRSCLSKVSSYSG
LYTVRSPQYRCDACLHSGNLYDISEDQFLHPDGRGTGGGSVDRSFSPFLHQPDASFTAYL
PQSDQEGDGLISHYQNEGVIIRQHSYENLPQKSTSRRVSLQDSTPYANMPSATLIPDKPL
KNQSVHLNHTLGGVGVSGLGIGRRSKSMYPARPTENPFLQTLRDDQRLAHGRSSTDIYKQ
LVPLTLGQADGNMLGVGMVTPDLYYPEHVMPYVAPPPIGTYTAPRAMSAGGARRVYKRMP
SIESDV
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atgatgggagctatagtctggttaatggtcttatgggctttgctgggttggtcgcaggct
gcagagaagcctccatccctgagtgtagctgtgatactgggccagacccccaccgtatcc
gaatcagccctgcgtccggctcgtgggataggtgcgccgctggatgtgactgtactcagc
gtccaggtgaaccagacggacccaggaagcatgcttacacacctgtgtgaactcatgtcc
agacagagactgcacgggctggtctatggagacggcacagaccaggaagcagtggcacaa
atgctggactttgtttcctctcagacttccatgcccatactgggaatccatggcggctct
gccatgaccatggccgaaaaggatgccagttcttcgtttttccagtttggggcctccctc
cagcaggaggcgttgttgatgcttgctataatggaggagtacgactggcacatattctca
gtggtcaccaccaagttcccaggcttccaagagttcatagccaccgtacgtgtcacggtg
gaccacagcttcattcgttgggaccttcagggcgtagtgacgctggacggtgttggcgaa
cctgaggaccgagcccacgtgcagcttaaacgtatccagtcacccgtcatcctcctctac
tgctccaaagacgaagcagcgctagttatggatgaagcccgttcgctagggctcaccggg
gctggctttgtgtggattgttcctagtttgacgacaggaaatatcgaacaaaccccggaa
gcctttccgatggggatgatatctgtggcgtacgacgaatgggattatcccctggagaag
cgcgtgcaggatgctgtgggaattatcagttctgcggccgctgccatgttcagagaggaa
ggtcgaatacccgacggtacagctagctgctacggccaatctgagaagccagaggtgccg
gcaagtgctctgcgcagatatatgatgggagtcaatctagggggtaaagatcattcattc
atggacgatggctaccaagtcaatcccaaactggttgtcattgttctgaacacgcagagg
gaatgggagaagatgggacgatgggaaaaccacacattgaagttgaagtttccagtgtgg
ccgcgttataattcgtttggggacgcggacgctgatgagaaccacttgagcattgtgact
ctagaggaaagaccctttgttatagtggatgatgtggacattcttactggcacatgtaat
cgtaactctgtaccttgcaggaaacacattaaagataattccacggacggctcctatgtc
aagaagtgctgcaagggcttttgtatagacatcctgaagaagattgccagaaatgtaaag
ttcacctatgatctttacctggtctcaaatggcaaacatggcaagaagatcaataatgtt
tggaacggcatggtgggggaggtatacaataaaaaggcgataatggccgtgggctcattg
accataaatgaagagcgttcagaggtcatagacttctctgtcccatttgtcgagacaggc
atcagcgtgatggtgtcacgtagcaatggaacagtgtcgccctctgcgtttctagaaccc
ttcagtgcttcggtgtgggttatgatgtttgtcatgttactcatcgtcacagcaatcgct
gttttcctctttgaattcatcagtccgctcggttttaatagaaacctggcgcagggcaaa
gaccctcatggaccctccttcaccattggtaaggcagtctggctgctgtggggtctggtg
ttcaacaactctgtcccagtacagaaccccaggggcactaccagtaaatttattgtatcc
gtatgggcctttttcgctgtgatcttcctggccagctacactgccaacttggctgccttt
atgatccaagaggaatttgtggaccaagtcacaggcctcagtgacagaaagtttcagagt
ccctattcctattcacctccgtttcgctttgggaccgtgcctaatgggagcacagagcga
aacatcaggaaaaactatccagacatgcaccagtacatggtgaaataccatcaaactgga
gttcaggatgcactggtcagcctcaagactggtaaactggatgctttcatatatgatgcg
gctgtgctcaactatatggcggggcgtgatgatggctgtaagctagtaactattggcagt
ggctacatctttgccacaacaggatatggcattgccctgcaaaaaggatcctattggaaa
cggcatgtcgaccttgctatcctcgggatcattggagatggtgagatggaggagctggag
gcccagtggctaactggtatctgtcataatgagaagaatgaagtgatgagcagtcaactg
gatgtggataatatggctggtgtgttctatatgcttgcggctgccatggctctgtcgcta
attacttttgtctgggagcacctcttctactggaggctacgttactgtttcactggtctc
tgttctggtcggccaggaattctcttcactatcagcagggggatttggagttgcattcac
ggtgtccatatcgaaatgaagaaagccccagagttgggcttcagccctcaggccaacatg
ttgcaccttctgaaatcggctaaagagatcaccacccttggagttacctcacccaaacgc
cccgggagtagcattctccctcctacccagggcttgctggaaattatgggcggaggaaaa
ggcaacaacctcacccagaaaaacgcgccctttagcaataccagcaccatgctcagcaac
cgtcacaaagagccacttaacaacactctcttgccagggcaacgtgccctgagcttgacg
gatgctcagccaggtgttgctggaaacgggggctcaggaggcggaggtgagaccatacga
cctcctgcctccaagccacgtgctctgtggaagaagtctgtggagaccctacggcagaac
ccagagcctgggggaaattccccaccatctgccccacagcctaccgagaccctaccaatg
aagagccagcgctacctgcccgaagatgcacctacccgctcggatatgtcagattgctct
ggtcgggtggacttgcagaagcagcacaagttaaaagaaactgttcgaaaacggaaccgc
ctaccgcgggacctgagcgacttggagctttcaacattgcggagccaaccgagccagcag
agcaaccacagcgctcagatgtactctcagagcagccaagggagtcagatttataccatt
gactccattgaccaggagcatgggctgcactacccagatatcttcagcgaccaccgtgac
actaagcaccggccaccttcttcctccgagcagcagccaattttgcagctgaacagcagt
ctgctctcccaggcccatgaaccagacgtgatgcaaaccgccgttgcgaaggataaaaaa
tacaacacatatggaaagtccggcggggcagggagcatcgccggcgggtctggttctact
caggatccacgacagacacactgccgaagctgcctgtcgaaagtgtccagttactccggg
ctttacactgtacggtcccctcagtatcgctgcgatgcctgcctgcactctggaaacctg
tacgacatcagcgaagaccagttcctccatccagatggacggggcaccggcggcggaagt
gttgacaggtccttctctccttttctccaccagcctgatgcttccttcacagcctatctt
ccccagagtgaccaagagggtgacggtcttattagtcactaccagaacgagggcgtgatc
atccgccagcactcgtatgagaacctgccacagaagagtacctcgcggcgggtgagcctg
caggacagcacgccgtatgccaacatgccctcggcgactttgatcccagacaagccccta
aaaaatcagtctgtgcacctaaaccacaccctcgggggggtgggtgtcagtggactcggg
attggtcgccgcagcaagtcgatgtatccagcgcgcccgacggaaaacccctttctccag
acgcttcgtgacgaccagcgtctagctcacggccgcagctccacagacatttataagcag
ctggtgccgctcacattaggccaggctgatggcaatatgctcggtgtggggatggtgacc
cctgacctctattaccccgagcatgtgatgccttatgtagcccctccccctatcggcaca
tacactgcccccagggcaatgagcgctgggggcgctcggcgtgtctacaagaggatgccg
agcatcgagtctgatgtctga
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integrated database retrieval system
