Rhodomicrobium lacus: QMO75_01165
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Entry
QMO75_01165 CDS
T09241
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
rlac
Rhodomicrobium lacus
Pathway
rlac00190
Oxidative phosphorylation
rlac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rlac00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
QMO75_01165
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QMO75_01165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rlac03019
]
QMO75_01165
Enzymes [BR:
rlac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
QMO75_01165
Messenger RNA biogenesis [BR:
rlac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
QMO75_01165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
MR_MLE_C
Diphthamide_syn
Motif
Other DBs
NCBI-ProteinID:
WKW51136
LinkDB
All DBs
Position
261759..263984
Genome browser
AA seq
741 aa
AA seq
DB search
MKIAEAEPAPTYRDRIEAFGVERFFNRELSWLAFNKRVLEESANTRNPLLERVRFLAISG
SNLDEFYRVRVAGLHEQAATEIVEVSPDGLTPKQQVDKINESVVPLSAIQQERWNALREE
MEQENIQIATAASISDAERDWLEIYFMRRVFSALSAVAVDAAHPFPHVQSQELVLVLECT
RELTLVRDSDFEGEPRLMYALVVIPNGLDRFIRLPQTEGEGGRPVIRFIAMEVLIALYAH
TLLPGFKVRHVGLFRPLRNSEIEFQEKSEDLQKVLRKALVRRQLGEVIRLEMSASLPAPA
RELIIAGLKIGRDDVVPVDGLFAIADVSQLIVNDRPDLLYKPFEIRFPERIAEFDNDCFA
AISAKDIIVHHPYESFDVVLQYLRQAASDPDVVAIKWTLYRTSKRSPIVEALRQAREAGK
SVTVMIEVTARFDELNNLEWAKQLEAVGVHVVYGLTQLDLKTHAKLGQVVRKENGELRTY
CHIGTGNYHPATAKIYTDLSYFTADPAVGRDVSRIFNYVTTYSRPNNLERMYISPHGIKA
RIIEEIHNEIAHAKAGRPAAIWMKLNALVDPEVIDALYEASLSGVPVDLVIRGICCLKPG
IRGLSENIRAKSIIGRFLEHSRIYCFGAGHGLPSEDAHVYISSADMMPRNLERRVEAMTA
ITNSTVHEQVLDQIMIANLKDNLQSWKIESDGSSQRFHLKPGEEPFSAHEYFMTNPSLSG
RGGALKQNFPRRFAVASAPHA
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgccgaagccgaacctgcccccacataccgggacagaatagaagcctttggc
gtggaacgcttcttcaacagggaattgtcgtggctcgcattcaacaagcgcgtccttgag
gaatcggcgaacacccgcaacccccttctggagcgcgtccggtttctggcgatttcgggc
tccaacctcgatgagttctatcgcgtgcgcgtggcggggctgcacgaacaggcggcgacc
gagatcgttgaagtctcgcccgacggactgacgccgaagcagcaggtggacaagatcaac
gaatccgtcgttccgctttccgcgattcagcaggagcgctggaacgcgcttcgcgaggag
atggagcaggagaacatccagatcgccaccgcggcgtcgatttccgacgcggaacgggat
tggctcgaaatctatttcatgcggcgggttttttcggcgctgagtgccgtggcggtggac
gccgcgcatcctttcccacacgtgcagagccaggaactggtgctcgtgctggaatgcacg
cgggaactcactctcgtccgcgattcggatttcgagggcgaaccgcgcctgatgtatgcg
cttgtcgtgatcccgaacggtctcgatcgcttcatccgactgccgcagacggaaggcgag
ggcggcaggcccgtgatccgcttcatcgcgatggaagtgctgatcgcgctttacgcgcac
acgctgttgccgggcttcaaggtcaggcatgtcggtctcttcaggccgctgcggaacagc
gaaatcgagtttcaggaaaaaagcgaggatcttcagaaggtgctccgcaaggcgctggtg
cggcgccagctcggcgaggtgatccggctcgaaatgagcgcgtcgttgcctgcgcccgcg
cgcgaactcatcatcgccgggctcaagatcgggcgagacgacgtggtgccggtcgacggg
cttttcgccatcgccgatgtctcgcaacttatcgtgaacgaccggccggacctgctctac
aagccctttgaaatccgctttccggaacggatcgccgagttcgacaatgactgtttcgcg
gccatctcggccaaggacatcatcgttcatcatccgtacgagtcgttcgacgtggtgctg
caatatctgcggcaggccgcatccgatcccgatgtcgtcgccatcaaatggacgctctac
cgcacgtcgaaacgctctcccatcgtggaggcgctccggcaggcgcgcgaggcgggcaag
agcgtgaccgtgatgatcgaagtgaccgcccgcttcgacgaattgaacaacctcgaatgg
gcgaagcagctcgaagcggtgggcgtgcacgtggtctacggcctgacccagctcgatctc
aagacgcatgcgaagctcggtcaggttgtgcgcaaggagaacggcgagcttcgcacctat
tgccacatcggcaccggcaattatcacccggcgacggcgaagatctacacggacctgtcc
tatttcacggccgacccggctgtcggccgcgacgtgtcgcgcatcttcaattacgtgacg
acctacagccgcccgaacaacctcgaacgcatgtatatctcgccccacggcatcaaggct
cggatcatcgaggagatccataacgagatcgctcacgccaaggccgggcgccccgccgcg
atctggatgaagctcaacgcgctcgtcgatcccgaggtgatcgatgcgctctatgaggcg
agtctgtcgggcgtacccgtcgacctcgtcatccgcggcatctgctgcctcaagcccggc
attcgcggactttccgaaaacatccgcgcgaaaagcatcatcggacgatttctggaacat
tcacgcatctattgtttcggggcagggcacggattgccatccgaggatgcgcacgtgtat
atcagttccgccgacatgatgccgcgcaaccttgagcggcgcgtcgaggccatgaccgcg
ataacgaattcaaccgtccacgaacaggttctcgaccagatcatgatcgccaatctgaag
gataatctccagagctggaaaatcgagagcgatggcagctcccagcgctttcacctgaag
cccggcgaggaacccttcagcgcgcatgagtatttcatgaccaatcccagcctttccggg
cgcggcggcgcactcaagcagaatttcccgcgacgtttcgcggtcgcatcggcgccgcat
gcctga
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