Rhodomicrobium lacus: QMO75_12505
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Entry
QMO75_12505 CDS
T09241
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
rlac
Rhodomicrobium lacus
Brite
KEGG Orthology (KO) [BR:
rlac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rlac03009
]
QMO75_12505 (rimO)
Enzymes [BR:
rlac01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
QMO75_12505 (rimO)
Ribosome biogenesis [BR:
rlac03009
]
Prokaryotic type
ribosomal protein modification factors
QMO75_12505 (rimO)
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
Motif
Other DBs
NCBI-ProteinID:
WKW50104
LinkDB
All DBs
Position
complement(2795415..2796761)
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AA seq
448 aa
AA seq
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MPKPVAERAASSAPKVGFVSLGCAKALVDSERILTRLRAEGYVISPDYDGADVVVVNTCG
FLDSAKAESLDAIGEAMAENGRVIVTGCFGVEDRRIRDSFPDVLAVTGPHQYDAVVNAIH
AAAPAPHAPFLDLVPPAGLRLTPPHYAYLKISEGCHNRCSFCIIPQLRGDLVSRPAADVL
AEAEALVEGGAKELLVISQDTSAYGLDLKYAASDWRGAPVKARLTELCNALGSLGAWVRL
HYVYPYPHVDELLPLMAEGKILPYLDIPFQHASLNVLKAMRRPANQEKTLETIRRWREAV
PDLGLRSTFIVGFPGETEEDFAVLLDWLREAKLTRVGCFKYENVEGAPSRALDGHVPEEV
KDERFARLMEVQREVSAAVLAGQVGKTIDVIIDEVDEDGATGRGPWDAPEIDGSVLFEDA
GDMEPGDIVRATIVEADDYDLWAEPVAE
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagccggtagcagagcgggccgcgtccagcgcgcccaaggtgggatttgtcagc
ctcggctgcgcgaaggcgctggtcgactccgagcgcatcctcacccgccttcgcgccgag
ggctacgtgatctcgcccgactatgacggcgcggacgtcgtcgtcgtgaacacctgcggc
ttcctcgacagcgctaaggctgaaagcctcgacgccatcggcgaggctatggccgagaac
ggacgcgtgatcgtgacggggtgtttcggcgtcgaagatcgccggattcgcgattcgttc
ccggatgttctggccgtcaccggcccgcaccaatacgacgccgttgtgaacgcgatccac
gccgccgcgcccgcgccgcatgcgccgttcctcgacctcgtgccgccagccgggctgcgc
ctcacgccgccccattacgcctatctcaaaatatcagagggctgccacaatcgctgttcg
ttctgcatcattccgcagcttcgcggcgacctcgtcagccgccccgccgccgatgtgctc
gccgaagccgaggcgctcgtcgaaggcggcgcgaaggaactgctcgtcatcagccaggac
acgagcgcctacgggctcgacctgaaatacgccgcgagcgactggcgcggcgcgccggtg
aaggcgcggctcacggaactctgcaacgcgctcggttcgctcggcgcatgggtgcgcctg
cactacgtctacccctatccccatgtggacgagcttctgccgctgatggccgagggcaag
attctgccctatctcgacatcccgttccagcatgcttcgctgaacgtgttgaaagcgatg
cgtcgccccgccaatcaggaaaagacgctcgaaaccatccgccgttggcgcgaggcggtg
ccggacctcggtcttcgctcgaccttcatcgtcggctttcccggcgagacggaggaggat
ttcgcggtcctgctcgactggcttcgcgaagcgaaactgacacgcgtcggctgcttcaaa
tatgagaatgtcgaaggcgcgccgagccgtgcgctcgatgggcatgtgccggaagaggtg
aaggacgagcgctttgcgcggctgatggaagtgcagcgcgaggtgagcgccgccgtgctc
gcgggccaggtcggcaaaaccatcgacgtcatcatcgacgaggtggatgaggacggcgcg
accgggcgcggtccgtgggacgcgccggaaatagacggctcggtgctgttcgaggacgcg
ggcgacatggagccgggcgacatcgtgcgggccaccatcgtcgaagcggacgactacgat
ctctgggcggagccggtcgcggaatag
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