Rubripirellula lacrimiformis: K227x_42590
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Entry
K227x_42590 CDS
T07352
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
rlc
Rubripirellula lacrimiformis
Brite
KEGG Orthology (KO) [BR:
rlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rlc03009
]
K227x_42590 (rimO)
Enzymes [BR:
rlc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
K227x_42590 (rimO)
Ribosome biogenesis [BR:
rlc03009
]
Prokaryotic type
ribosomal protein modification factors
K227x_42590 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
QDT05854
UniProt:
A0A517NFE2
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All DBs
Position
5619378..5620793
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AA seq
471 aa
AA seq
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MQLPIVSESQTLPGKAPAASTDGVRGRYAVISLGCPKNLVDTEQMLGRLDEDGYAMVESV
ETADFVVVNTCGFIDSAREESLGAIDEMLALKKSGKIRNVVVTGCLAERQQGKLLEARPE
IDAMIGVFGRNEIVSVIDRLQSGVEEQEKVFRPAPIKPLSDAVRRAVTPRHFAYLKISEG
CDRLCTFCAIPKMRGKHYSKPIEQIIDEAKRLGDSGVREVVIVAQDTTYYGKDLYGEPRL
TELLTELDKIESIDWIRLMYFYPMYIDDALVDVLANAKRIVPYIDMPLQHASDTMLKRMA
RKTTRGLQEEILANLRSRIPNLIMRTTLITGFPGETEDDIDQLCDFVAKQKFEHLGVFTY
SVEEDTPAAKLPNRVPADVAQARYDRVMEVQQKVAFKWIESRIGTTETVIIDSPLPDQPG
VWIGRTRGEAPDIDGIVYVSGIDPDDPLEVGDMIDCEIVASDGYDLVAAPL
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgcagctccccatcgtctctgagtcgcaaacccttcctggcaaggctcctgctgcgtcg
accgatggtgttcgcggccgttatgccgtcatttccctcggttgtcccaagaacttggtc
gacaccgaacaaatgctgggccgactggacgaagacggctacgcgatggttgaatccgtc
gaaacggcggacttcgtggtcgtcaatacgtgcggtttcatcgattcagcccgtgaagaa
tcgttgggcgcgatcgacgaaatgctggcgctgaagaaatcgggcaaaatccgaaacgtc
gtcgttacaggctgtttggccgaacgtcagcagggaaaactgctggaagctcgccccgaa
atcgacgcgatgatcggcgttttcggtcgcaacgaaattgtttcggtgatcgaccgcctg
caatcgggcgtcgaagaacaagaaaaggtgttccggcctgcaccgatcaagccactgtcg
gacgccgtccgccgtgccgtcacaccacgccactttgcgtatctgaagatcagcgaaggc
tgcgatcgactgtgcaccttctgtgcaatccccaagatgcgcggcaagcactacagcaag
ccgatcgaacagatcatcgacgaagcgaagcgtctgggcgacagcggtgtccgcgaagtc
gtcatcgttgcccaggacacaacctattacggcaaagatctgtacggcgaaccgcgacta
accgaactgctaaccgagctggataaaattgaatcgatcgattggattcggttgatgtat
ttttacccgatgtacatcgatgacgcgctggtcgatgtcttggcaaacgccaaacgaatc
gtgccgtacatcgacatgccgctgcaacatgcatccgacacgatgctgaaacggatggct
cgcaagaccacgcgcggcctgcaagaagagatccttgcgaacctgcgatccagaatcccc
aacctgatcatgcggaccacactgatcaccggtttccccggcgaaaccgaagacgacatt
gaccaactttgcgactttgtcgccaaacagaaatttgaacacttgggcgtcttcacttac
agcgtcgaagaagacacgcccgcggcgaaactgcccaaccgtgttccagcggatgtcgct
caggcgcgatacgatcgagtcatggaagtgcaacagaaggttgctttcaagtggatcgaa
agccgcatcggcaccaccgaaacggtgatcatcgactcgccgctgccggatcaaccgggc
gtgtggatcggtcggacccgaggcgaagcaccggatatcgacgggatcgtttacgtttca
ggcatcgatccagacgatccgttggaagtcggcgacatgatcgactgcgagatcgttgct
tcggacggttacgatttggtcgccgcaccgctgtaa
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