Rhizobium johnstonii: RL1099
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Entry
RL1099 CDS
T00402
Symbol
hsdMch1
Name
(GenBank) putative type I restriction enzyme modification methylase subunit
KO
K03427
type I restriction enzyme M protein [EC:
2.1.1.72
]
Organism
rle
Rhizobium johnstonii
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
rle02048
]
RL1099 (hsdMch1)
Enzymes [BR:
rle01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.72 site-specific DNA-methyltransferase (adenine-specific)
RL1099 (hsdMch1)
Prokaryotic defense system [BR:
rle02048
]
Restriction and modification system (R-M system)
Type I R-M system
RL1099 (hsdMch1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
N6_Mtase
UPF0020
HsdM_N
N6_N4_Mtase
MmeI_Mtase
Hormone_3
Motif
Other DBs
NCBI-ProteinID:
CAK06596
RhizoBase:
RL1099
UniProt:
Q1MKB0
LinkDB
All DBs
Position
complement(1179706..1180941)
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AA seq
411 aa
AA seq
DB search
MNANAIVQKLWRLCTVLRKDGITYQQYVTELTYLLFLKMMAERNRETGSLPRSMRWADLV
QANGLAKLELYRKTLVTLGTVSTRLGKDDALVLPPGENATPDERKRYADARPLPEMVQEI
FDNASTFIREPQNLTTLVTAIDELDWFSEDRDQFGDLYEGLLQKNAEETKRGAGQYFTPR
VLIELLVRLMQPKPGEVIQDPAAGTGGFLIAADRYMRAVTDNYFDLGRKQQEFQKRHAFH
GMENVPGTLRLLLMNLYLHNIDSDHVDLGDTLSDKGKGLGRANLILTNPPFGPAGGAPTR
DDLSVTATVSSYQLPFVEHCIRALQPGGRAAIVVPDNVLFEDGRGRQLRQMMMDWCDVHT
ILRLPTGIFYAQGVKTNVIFLTRAKTETGTQRPCGSTTCAPRCRNLARPRH
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccaatgccatcgtccagaaactctggcgcctctgcactgtgctcaggaaggac
ggcatcacctaccagcaatatgtgaccgagctgacctatctattgtttctgaagatgatg
gctgagcgcaaccgcgagacgggaagcctgccaaggtccatgcgctgggccgatctggtt
caagcaaacggtctcgcaaagctggaactttaccgcaaaacgctggtgacgctgggtacg
gtcagcactcgcctcggcaaggatgacgcgctcgtcctgccgccgggcgagaatgcgacg
ccggatgagcgcaagcgttatgccgatgcccgcccgcttccggaaatggtacaggaaatc
ttcgacaatgcctccaccttcattcgcgagccgcagaacctgacgacgctggttaccgcc
atcgacgagctcgactggttctccgaggaccgcgaccagttcggcgatctttatgaaggt
ctgctgcagaagaacgcggaagaaaccaagcgcggcgccgggcaatattttaccccgcgc
gtgctgatcgagcttctggtccgcctgatgcagccaaagcccggcgaggtgatccaggac
cccgccgctggcaccggcggcttcctgatcgccgccgaccgctacatgcgcgcggtcacg
gacaattatttcgatctcggcaggaagcagcaggagttccagaaacgccatgccttccat
ggcatggaaaacgtacccggcacactgcgcctactcttgatgaacctctacctgcacaac
attgacagcgaccatgtcgatctgggtgatacgctgtccgacaagggcaaggggctcggc
cgcgccaacctcatcctcaccaacccgcccttcggcccggcgggcggcgcgccgacgcgc
gacgatctgtccgtcaccgccaccgtctcctcctaccagcttcccttcgtcgaacattgc
attcgcgcgctacagcccggcggccgtgcagccatcgtcgtaccggataatgtgctcttt
gaggatggccgcggaaggcagcttcgccagatgatgatggactggtgcgacgtacatacg
atcctgcgcctgcccactggcattttctatgcgcaaggggtgaagaccaatgtcatcttc
ctgacgcgcgccaagacggagaccggaacacaaaggccgtgtggatctacgacctgcgcg
cccagatgccgaaatttggcaagaccacgccactga
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