Rhizobium johnstonii: RL2088
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Entry
RL2088 CDS
T00402
Symbol
accC1
Name
(GenBank) putative biotin carboxylase
KO
K01961
acetyl-CoA carboxylase, biotin carboxylase subunit [EC:
6.4.1.2
6.3.4.14
]
Organism
rle
Rhizobium johnstonii
Pathway
rle00061
Fatty acid biosynthesis
rle00620
Pyruvate metabolism
rle00640
Propanoate metabolism
rle01100
Metabolic pathways
rle01110
Biosynthesis of secondary metabolites
rle01120
Microbial metabolism in diverse environments
rle01200
Carbon metabolism
rle01212
Fatty acid metabolism
Module
rle_M00082
Fatty acid biosynthesis, initiation
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
RL2088 (accC1)
00640 Propanoate metabolism
RL2088 (accC1)
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RL2088 (accC1)
Enzymes [BR:
rle01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.14 biotin carboxylase
RL2088 (accC1)
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.2 acetyl-CoA carboxylase
RL2088 (accC1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Dala_Dala_lig_C
ATP-grasp
ATP-grasp_3
ATPgrasp_Ter
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
CAK07580
RhizoBase:
RL2088
UniProt:
Q1MHI3
LinkDB
All DBs
Position
complement(2198726..2200081)
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AA seq
451 aa
AA seq
DB search
MPMISKILIANRGEIALRVLRACKELGIACVAVHSTADADAMHVRLADESVCIGPPSSRE
SYLNIHQIVAACEITGADAVHPGYGFLSENAKFADILEAHGITFIGPTADHIRIMGDKIT
AKTTALELGIPVVPGSDGEVKTEEDALKTAAEIGYPVLIKATAGGGGRGMKVAKSEADLI
EAWSTARTEAAAAFGNDAVYMEKYLGKPRHIEIQVFGDGEGNAIHLGERDCSLQRRHQKV
WEEANSPALNVEQRMKIGQVCADAMKKLKYRGAGTIEFLYENGEFYFIEMNTRLQVEHPI
TEAITGIDLVHEQIRVASGGGLSVTQDEVHFSGHAIECRINAEHPRTFVPSPGTITHFHA
PGGLGVRIDSGAYQGYKIPPYYDSLIGKLIVHGRTRVECMMRLRRALDEFVVDGINTTLP
LFQDLVSNQDIANGDYDIHWLEEYLANTPAA
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcccatgatttcgaaaatcctcatcgccaatcgcggggaaatcgcccttcgcgtgctc
cgggcctgcaaggagctgggtatcgcctgcgtcgcggttcattccaccgccgacgccgat
gccatgcatgtgcgccttgccgacgaaagtgtgtgcatcggcccgccctcctcgcgcgag
agctatctcaacatccaccagatcgtcgccgcctgcgagatcaccggcgctgacgccgtg
catccgggctacggctttctgtcggagaatgccaagttcgccgatatcctcgaagcccac
ggcattaccttcatcgggccgacggccgaccatatccgcatcatgggcgacaagatcacc
gccaagacgacggcgctcgagctcggcattcccgtcgttccgggctcggacggcgaagtg
aagaccgaagaggatgcgctgaagacggcggctgaaatcggctatcccgtgctgatcaag
gccacggccggcggcggcggacgcggcatgaaggtcgccaagagcgaggccgacctgatc
gaggcctggtcgacggcgcgcacggaagcggcagccgccttcggcaacgatgccgtttac
atggaaaaatatctcggcaagccgcgccacatcgaaatccaggtgttcggcgacggcgaa
ggcaatgccatccatctcggcgagcgcgactgctcgctgcagcggcgccatcagaaggtc
tgggaagaggcgaattcgccggcactcaacgtcgagcagcgcatgaagatcggccaggtc
tgcgccgacgccatgaagaagctgaaatatcgcggcgccggcacgatcgaattcctctac
gaaaacggcgagttctatttcatcgaaatgaacacccgcctgcaggtggagcatccgatc
accgaagcgatcaccggcatcgacctggtgcacgagcagatccgcgtcgcttccggcggc
ggtctctcggtgacgcaggatgaagtacatttttccggtcacgccatcgaatgccgtatc
aatgccgagcacccgcgcaccttcgtgccttcgcccggtacgatcacgcatttccacgcg
ccgggcggcctcggcgtgcgcatcgattccggcgcctatcagggctacaagatcccgccc
tattacgacagcctcatcggcaagctgatcgtgcacggccgtacccgcgtcgaatgcatg
atgcgcctgcgccgggcgctcgacgaattcgtcgtcgacggcatcaatacgacgctgccg
ctgttccaggatctcgtctccaaccaggatatcgccaacggcgattacgacatccactgg
ctggaagaatacctcgccaatacaccggcggcatag
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