Rhizobium johnstonii: RL2242
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Entry
RL2242 CDS
T00402
Symbol
pdhB
Name
(GenBank) putative pyruvate dehydrogenase
KO
K00162
pyruvate dehydrogenase E1 component subunit beta [EC:
1.2.4.1
]
Organism
rle
Rhizobium johnstonii
Pathway
rle00010
Glycolysis / Gluconeogenesis
rle00020
Citrate cycle (TCA cycle)
rle00620
Pyruvate metabolism
rle00785
Lipoic acid metabolism
rle01100
Metabolic pathways
rle01110
Biosynthesis of secondary metabolites
rle01120
Microbial metabolism in diverse environments
rle01200
Carbon metabolism
rle01210
2-Oxocarboxylic acid metabolism
Module
rle_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
RL2242 (pdhB)
00020 Citrate cycle (TCA cycle)
RL2242 (pdhB)
00620 Pyruvate metabolism
RL2242 (pdhB)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
RL2242 (pdhB)
Enzymes [BR:
rle01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.1 pyruvate dehydrogenase (acetyl-transferring)
RL2242 (pdhB)
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GFIT
Motif
Pfam:
Transket_pyr
Transketolase_C
Biotin_lipoyl
PFOR_II
Biotin_lipoyl_2
QRPTase_N
Motif
Other DBs
NCBI-ProteinID:
CAK07734
RhizoBase:
RL2242
UniProt:
Q1MH33
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Position
2363775..2365166
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AA seq
463 aa
AA seq
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MPIDILMPALSPTMEEGTLSKWLKQEGDKVTSGDVIAEIETDKATMEVEAVDEGVIGKLL
VPAGTEGVKVNAKIAVLLQDGESASDMSASAPAAAPAAAPQAAQEEKPAAATPASAPVPA
EPKAQVQNDPEIPAGTEMVSTTVREALRDAMAEEMRADENVFVMGEEVAEYQGAYKVTQG
LLQEFGPRRVVDTPITEHGFAGVGVGAAMAGLRPIVEFMTFNFAMQAIDQIINSAAKTLY
MSGGQMGAPIVFRGPNGAAARVGAQHSQDYAAWYSAIPGLKVVMPYTASDAKGLLKAAIR
DPNPVIFLENEILYGQHFDVPKLDNFVLPIGKARIHRPGKDVTVVSFGIGMTYAIKAVAE
LEKLGIDVELIDLRTIRPMDLPAVIESVKKTGRLVTVEEGYPQSSVGTEIATRVMQQAFD
YLDAPILTIAGKDVPMPYAANLEKLALPNVGEVVDAVKAVCYK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgcctatcgatatcctcatgcccgccctctctccgaccatggaagaaggcacactgtcc
aaatggctgaagcaggaaggtgacaaggtcacttcaggcgacgtgatcgccgaaatcgaa
accgacaaggcgacgatggaagtcgaagccgtcgacgaaggcgtcatcggcaagcttctg
gttcctgctggaaccgaaggcgtcaaggtgaacgccaagatcgccgttctcctgcaggac
ggtgaatccgcatccgacatgtctgcgtccgctccggcagcagcgccggctgctgcaccg
caggccgcgcaggaggaaaagccggctgccgcaactccggcatccgcacccgttccggcc
gagccgaaagcccaggtgcagaacgaccccgaaatcccggccggcaccgaaatggtgtcg
acgaccgtgcgcgaagcgctgcgcgacgccatggccgaggaaatgcgcgccgacgaaaac
gtcttcgtcatgggcgaggaagtcgccgaataccagggcgcctacaaggtcacgcagggg
ctgctgcaggaattcggcccccgccgcgtcgtcgatacgccgatcaccgagcatggcttt
gccggcgtcggcgtcggtgccgccatggccggccttcggccgatcgtcgagttcatgacc
ttcaacttcgccatgcaggcgatcgaccagatcatcaactccgctgccaagacgctctac
atgtccggcggccagatgggcgctccgatcgtcttccgcggcccgaatggtgcagcggcc
cgtgtcggcgcccagcacagccaggattatgcagcctggtacagcgccattcccggcctg
aaggtcgtcatgccctacacggcatccgatgccaagggcctactgaaggctgcgatccgc
gatccgaacccggtcatcttcctcgaaaacgaaattctctacggccagcacttcgatgtg
ccgaagcttgacaatttcgtcctgccgatcggcaaggcgcgcatccatcgtccgggcaag
gacgtcaccgtggtctccttcggcatcggcatgacctatgcgatcaaggctgtcgccgaa
ctcgaaaagctcggcatcgatgtcgaactgatcgaccttcgcactatccgcccgatggac
ctgccggctgtgatcgaatcggtgaagaaaaccggacgtctggtgaccgtcgaggaaggt
tatccgcaatcatccgtcggcaccgaaatcgccacccgcgtcatgcagcaggccttcgac
tatctcgatgcgccgatcctgacgatcgcaggcaaggacgttccgatgccttacgccgcc
aatctcgaaaagctcgcccttccgaacgtcggcgaagtggtcgatgcggtgaaggctgtt
tgctacaaataa
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