Rhizobium johnstonii: RL2639
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Entry
RL2639 CDS
T00402
Name
(GenBank) putative indigoidine A related protein
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
rle
Rhizobium johnstonii
Pathway
rle00240
Pyrimidine metabolism
rle01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
RL2639
Enzymes [BR:
rle01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
RL2639
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
TcdA_TcdB_pore
Motif
Other DBs
NCBI-ProteinID:
CAK08127
RhizoBase:
RL2639
UniProt:
Q1MFZ6
LinkDB
All DBs
Position
2780601..2781554
Genome browser
AA seq
317 aa
AA seq
DB search
MLSRSQDKTMTKPISPLLPIAYSKEVASAKQRGAPLVALESTIITHGMPYPGNIEMARSV
EAIIREQGAVPATIAVIHGTLHIGLEAAELEQLAKATEVMKVSRADLAFAIAERRTGATT
VAATMIAAARAGIRVFATGGIGGVHRGAEESFDISADLEELARTGVIVVCAGAKAILDIP
KTLEVLETRGVPVVTYESEEFPAFWSRSSGIRSPLSLNSPAAIANFQTVREQLGIDGGML
VANPVPEADEIASEEMEIYIERALDSAERDEVTGKAVTPYLLSTIFDLTDGQSLKTNIAL
VENNARLAAEIAVALGE
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgctcagtcgatcacaggacaagaccatgactaagcccatctcccctcttctgccgatc
gcctattcgaaggaagtcgccagcgccaagcagcgcggcgcgccgctggtggcgctggaa
tcgacgatcatcacccacggcatgccctatcccggcaatatcgagatggcccgcagcgtc
gaggccatcattcgcgaacagggtgcggtgccggcaacgatcgccgtcattcacggcacg
ctgcatatcggcctcgaagctgcggaactggagcaactcgccaaggcgaccgaagtgatg
aaggtgtcacgcgccgatctcgccttcgccatcgccgagcgccgcaccggcgccaccacg
gtcgcggcgacgatgatcgcggcggcgcgcgccggcatccgcgtctttgccacaggcggc
atcggcggcgtgcatcgcggtgccgaggaaagtttcgatatatcagccgatctcgaggaa
ctggcgcgcaccggcgtcatcgtcgtctgcgccggcgccaaggcgatcctcgacattccg
aagacgctggaagtgctggaaacccgcggcgtgcctgtcgtcacctatgagagcgaggaa
ttccccgccttctggtcgcgctcctcgggcatccgcagcccgctgtcgctgaacagcccg
gccgcgatcgccaatttccagacggttcgcgaacaactcggcatcgacggcggcatgctc
gtcgccaatccggtcccggaggccgacgagatcgcgagcgaggagatggaaatctatatc
gagcgggcgctcgacagcgccgaacgcgacgaagtcaccggcaaggcggtcacaccctat
cttctgtcgaccatcttcgacctgacggacggccagagcctgaagaccaacatcgcgctc
gtcgaaaacaacgcgcgacttgccgctgaaatcgcggtggcgctgggtgaatga
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