Rhizobium johnstonii: RL3107
Help
Entry
RL3107 CDS
T00402
Symbol
bgaB
Name
(GenBank) putative beta-galactosidase
KO
K12308
beta-galactosidase [EC:
3.2.1.23
]
Organism
rle
Rhizobium johnstonii
Pathway
rle00052
Galactose metabolism
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
RL3107 (bgaB)
Enzymes [BR:
rle01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
RL3107 (bgaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_42
Glyco_hydro_42M
Glyco_hydro_42C
Glyco_hydro_35
Cellulase
DUF4350
Glyco_hydro_14
Motif
Other DBs
NCBI-ProteinID:
CAK08593
RhizoBase:
RL3107
UniProt:
Q1MEN3
LinkDB
All DBs
Position
complement(3263220..3265352)
Genome browser
AA seq
710 aa
AA seq
DB search
MSDKTLSVWNPVKTDRFLVGAPHYPEHVDESYWERDAERMAKAGFNVVRMAEFAWHILEP
KLGTFDFDLFDRAIAMLGRYGIDTIMCTPTATPPRWLTVAHPEILRVDGKGRPMSHGSRQ
HCDTASPVFREHSRRITKAMAEHYRDNPFVVGWQTDNELNTSMPESFSKATLSEFQAFLA
GRYGEIGKLNTAWGGDFWATAYDGFDQVVLPIEFGPTFPSPGHLQDYHRFLAFSTARFQH
DQVEILRAVKPSWFVFHNLGGLRDIDFRGQFTTDLDFVGYDIYPMLYDEFQRLGNHAKVQ
ALHLDICRGFSGNYIVPEQQSGFGSQPGFCTLTPEPGELRRMALSSVAHGADGLMFFRWR
PAHFGAEIYWMGIIDHDDIGRHRYEEAKRFATEMTALKDKILGTYVRMDVGIAGSDFDNQ
EAHKTYPIGLPSPQDDAVLLHQYCYDRGIACGFIHPEDDLSKLKLLYVPHWVMWKDEWTE
RLKSFAEHGGTVVIGARTGTRNEDNHVIRETAPGTSLSQLTGVRVEDFGRLAAPGANGLF
DVMERSGGLVIPPNKPAESHRRERRFKIGNRELVGGYFYENLAIASDVEVVAAWSNRYAE
GQPMATSRKIGKGQVVYVGTYLTPDLTAALAERLFAPVGIEPLLGDLPEGVEVTMRMNDD
RRLLFIQNYTDQPAAIGGVPAGRDLLDDEKPVAGRLDLEGYGCAIIELAG
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgacaagaccctctccgtatggaaccccgtcaagaccgaccgcttcctcgtcggc
gccccgcattatcccgagcacgtcgatgaaagctactgggagcgcgatgccgagcgcatg
gcgaaggccggcttcaacgtggtcagaatggccgaattcgcctggcatattctcgagccg
aagctcggcaccttcgatttcgacctgttcgatcgtgccatcgccatgctcgggcgctac
ggcatcgacacgatcatgtgcacgccgacggcaacgccgccgcgctggctgaccgtggcg
catccggagatcttaagggtcgacggcaaggggcggccgatgagccatggctcgcgccag
cactgcgacacggcaagtccggtctttcgcgaacacagccggcggattaccaaagcgatg
gccgagcattatcgcgacaatccttttgtcgtcggctggcagaccgacaacgagctgaac
accagcatgccggagagcttttcgaaggcgacgctttccgaattccaggcctttcttgcc
ggcagatatggcgagatcggcaagctcaatacggcgtggggcggcgatttctgggcgacg
gcctatgacggcttcgaccaggtggtgctgccgatcgagttcggcccgacctttccgagc
cccggccatctgcaggattatcatcgctttctggccttctcgacggcgcgcttccagcac
gatcaggtcgagatcctgcgggccgtgaagccttcctggttcgtctttcacaatctcggc
ggtcttcgggatatcgatttccgcggccagttcaccaccgatctcgatttcgtcggctac
gacatctatccaatgctctatgacgagttccagcggctcggaaaccacgccaaggtccag
gcgctgcacctcgatatctgccgcggcttctccggcaactacatcgtgcccgagcagcaa
tcgggcttcggcagccagccgggcttctgcacgctgacgccggagccgggggagctgcgc
cgcatggcgctttcctcggttgcccatggcgccgatggactgatgttcttccgctggcgg
cccgctcatttcggcgccgagatctactggatgggcatcatcgatcatgacgatatcggc
cgccaccgctatgaggaggccaagcgcttcgcgaccgaaatgacggcgctgaaggacaag
atcctcggcacctatgtgcgcatggatgtcggcatcgccggctccgatttcgacaatcag
gaagcgcacaagacctatccgatcggcctgccgagcccgcaggacgatgcggtcctgctg
caccaatattgctacgaccgcggcatcgcctgcggcttcattcatcccgaggacgatctt
tccaagctgaagctgctctatgtgccccattgggtgatgtggaaggacgaatggactgaa
aggctgaaatccttcgccgagcacggcggcaccgttgtcatcggcgcgcgcaccggcacg
cgcaacgaagacaatcacgtcatccgcgagaccgcgcccggcacgtcgctatcccagctc
acgggcgtgcgtgtcgaggatttcggccgtctcgccgcccccggcgccaatgggcttttc
gatgtgatggaacgttcgggcgggcttgtgattccgccgaacaagccggcggaatcgcac
cgccgcgaacgccgcttcaagatcggcaaccgcgaactggtcggcggctatttctatgaa
aacctggcgatcgcaagcgatgtcgaggtagttgcggcctggtccaaccgctatgccgag
ggccagccgatggcgacgtcgcgtaaaatcggcaaggggcaggtggtctatgtcggcacc
tatctcaccccggatctgacggcagcgcttgccgagcggctgtttgcacccgtcggcatc
gagccgttactcggcgaccttcccgagggcgtcgaggtgaccatgcggatgaatgacgac
cggcggctgctgttcatccagaactacaccgaccagccggccgccatcggcggcgttccc
gctggccgtgatctcctcgatgacgaaaaaccggttgccggtaggctcgatctcgaaggc
tacggctgcgcgatcatcgagctcgcggggtga
DBGET
integrated database retrieval system
