Rhizobium johnstonii: RL4079
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Entry
RL4079 CDS
T00402
Symbol
kdsD
Name
(GenBank) putative arabinose 5-phosphate isomerase
KO
K06041
arabinose-5-phosphate isomerase [EC:
5.3.1.13
]
Organism
rle
Rhizobium johnstonii
Pathway
rle00540
Lipopolysaccharide biosynthesis
rle01100
Metabolic pathways
rle01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
RL4079 (kdsD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rle01005
]
RL4079 (kdsD)
Enzymes [BR:
rle01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.13 arabinose-5-phosphate isomerase
RL4079 (kdsD)
Lipopolysaccharide biosynthesis proteins [BR:
rle01005
]
Lipid A
RL4079 (kdsD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIS
CBS
DUF5998
Motif
Other DBs
NCBI-ProteinID:
CAK09568
RhizoBase:
RL4079
UniProt:
Q1MBW5
LinkDB
All DBs
Position
complement(4308107..4309102)
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AA seq
331 aa
AA seq
DB search
MNRRAINLVENSVLESAKRTIESERRGLEALEQAFDNGLAGPFTRAVEVIGDISGRVIVT
GVGKSGHIGAKLAATFASTGTPAFFVHAAEANHGDLGMIARDDVVLAISKGGESAELKSI
ISFTRRFSIPLIAITCSEGSSLAAAADIVLLIPNEQEACPNGLAPTTSTLMQLAIGDALA
VALLEARGFTATDFHVFHPGGKLGASLMHVADIMHTGERLPLVAKGTPMPEAITVLSRKH
FGCVGVLDEDGRLCGIVTEGDMARNLTRNLAELSVDDIMTRTPKTVRPTVLATAALALLN
QHHIGALIVIDDDRRPVGLVHFHDLLRIGVA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaagagcgatcaacctcgttgaaaacagcgtgctcgaatcggcaaaacgcacg
atagagagcgaaagacgcggtcttgaagcgctcgaacaggcttttgacaatggattggcc
ggtcctttcacacgggccgttgaagtcatcggcgacatctccggccgcgttatcgtcacc
ggcgtcggcaagagcgggcatatcggcgccaagctcgcggcgacattcgcgtcaaccggg
acgcccgcctttttcgtgcatgcggcggaggccaatcacggcgatctcgggatgatcgcg
cgcgacgacgtcgtgctggcgatttccaaaggcggcgagagcgccgagctcaagagcatc
atttccttcacgcggcgcttctccattccgctgatcgcgattacctgcagcgaaggttcc
tcgctcgcggccgccgccgatatcgtccttctgataccgaacgaacaggaagcctgcccc
aatgggctggcgccgacgacctcgacgctgatgcagcttgccatcggcgacgcgttggcg
gtggcgctcctggaggcgcgcggctttaccgccacggatttccacgtcttccatcccggc
ggcaagctgggcgcgagcctgatgcatgtcgccgatatcatgcataccggcgagcggctg
ccgctcgttgccaagggcacaccgatgccggaggcgatcacggtgctgtcgcgcaagcac
ttcggctgcgtcggcgtgctggacgaggatgggcggctctgcggcatcgtcaccgaaggc
gacatggcgcgcaacctgacgcgcaatctcgctgaactttccgtcgacgacatcatgacg
cggacgccgaagacggtgaggccgacggtgctggcgaccgcggccctggcgctgctcaac
cagcatcacatcggcgcgctgatcgtcatcgacgacgaccgccggcctgtcgggctggtg
catttccacgacctgctgcggatcggtgtcgcctga
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