Rhizobium johnstonii: RL4123
Help
Entry
RL4123 CDS
T00402
Symbol
soxA1
Name
(GenBank) putative sarcosine oxidase alpha subunit
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
rle
Rhizobium johnstonii
Pathway
rle00260
Glycine, serine and threonine metabolism
rle01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RL4123 (soxA1)
Enzymes [BR:
rle01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
RL4123 (soxA1)
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
RL4123 (soxA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
FAD_binding_2
DAO
GIDA
NAD_binding_8
AlaDh_PNT_C
Pyr_redox_3
HI0933_like
Thi4
FAD_binding_3
Pyr_redox
3HCDH_N
Fer2_BFD
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
CAK09612
RhizoBase:
RL4123
UniProt:
Q1MBS1
LinkDB
All DBs
Position
complement(4365262..4368255)
Genome browser
AA seq
997 aa
AA seq
DB search
MSGVNRIAGKGRLTPARTARFSFDGKSYTALEGDTVASALIANGVHLLGRSFKYHRARGI
LSAGAEEPNALIDVSRDTARKQPNVRATVQEVFDGMIVSSQNRWPSLAFDVGAVNNLMSP
FFAAGFYYKTFMWPRAAWKHVYEPLIRRAAGLGVAPTEEDPDHYASRYAHCDVLVVGAGV
AGLSAALAAAETGARVILCDEQAEAGGALRYDVGVRIDGQDGNSWAQKAVARLKAMDNVE
VLVRTTAFGYYNHNFVGLAERVTDHIAKPARDLPRERLWQVRAKRVILATGAIERHMVFP
NNDRPGIMLASAGRMYLNHYGVAVGTKVGIYTAHDSAYEAAFDLKRSGVSIAAIVDCRQT
PGAAVLEEARALGIDVLAGQSVVNTSGRLRISSMTVARNGGGSPRKIAVDALLVSAGWTP
SVHLFSQSRGKVAFDAESQRFLPGSYAQDCLSVGACNGTDDLQRTIEESLAAGELMAQAT
GRSSGEKIAISAEQAYDWTGGMIGAAEGAGPKTNAKAFIDFQHDVCAKDIRLAVREGMHS
IEHIKRFTTNGMASDQGKLSNMHGLAIAAEMLGKEIPQVGLTTFRAPYTPVTYGTLIGHS
RGELFDPTRKTPLHGWEEAHGAVFEDVGNWKRAWFYPQAGETMHQAVSRECRTAREAAGI
FDASTLGKIEVVGPDAAEFLNLIYTNAWDTLKPGKARYGIMTREDGFVYDDGVVGRLADD
RFHVTTTTGGAPRVLHHMEDYLQTEFPHLKVWLTSVTEQWAVIAVQGPKAREIVAPLVEG
LDLSNEAFPHMSVAECTVCGVPARLFRVSFTGETGFEINVPADYGQSVLEAVWANAEPLG
ACVYGTETMHVLRAEKGYIIVGQDTDGTVTPDDAGLSWAVSKKKTDFVGIRGLKRPDLVK
DGRKQLVGLVTKDPKLVLEEGAQIVASPNEPKPMTMLGHVTSAYWSENCGRSIAFALVAG
GRARMGETLYVPMPDRTIAVEVTDLVFFDKEGGRIHG
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgtgaaccgtatcgccggcaaggggcgcctgacaccggccaggaccgcgcgt
ttcagcttcgacggcaagagctatacggcgctcgaaggtgataccgtggcctcggcgctg
atcgccaacggcgtgcatcttctgggacgttcgttcaaatatcaccgggcccgcggtatt
ctgtcggcaggggccgaggagccgaacgcgctgatcgacgtttcccgcgatacggcgcgc
aagcagccgaacgtgcgcgccaccgtgcaggaagtcttcgacggcatgatcgtcagctcg
cagaaccgctggccctcgcttgccttcgacgtcggcgcggtcaacaacctgatgtcgccg
ttcttcgccgccggtttctactacaagaccttcatgtggccgcgcgccgcctggaaacac
gtctacgaaccgctcatccgtcgtgccgccggcctcggcgtcgccccgacggaggaggat
ccggaccattatgccagccgctatgcccattgcgacgtgctggtggtcggcgccggtgtt
gccgggctttcggcggcgctggctgcggccgagaccggcgcgcgggtgatcctttgcgac
gaacaggcggaagccggcggcgcgttgcgctacgatgtcggggtaaggatcgacggacag
gacggcaatagctgggcacagaaggctgtggcgcggctgaaggcgatggacaatgtcgag
gtgctggtccgcacgaccgccttcggctactacaaccacaatttcgtcggtcttgccgag
cgcgtcaccgatcatatcgccaagcctgcccgcgatctgccgcgcgagcggctttggcag
gtccgggcgaagcgcgtgatcctcgccaccggcgcgatcgagcggcacatggtatttccg
aacaacgaccggccgggcatcatgctcgcctcggcggggcggatgtatctcaatcattac
ggcgttgcggtcgggaccaaggtcggcatctacacggcgcacgactcggcctatgaggcg
gctttcgacctgaaacgatcaggcgtgtcgatcgccgccatcgtcgattgcaggcagacg
ccgggggcggcagtgctggaggaggcgcgggcgctcggcatcgacgttctggccggccag
tcggtcgtcaacacgtcagggcggctgcgtatctcgtcgatgacggtggcgcgcaacggc
ggcggttcgccgcgcaagatcgcggtcgatgcgctgctggtttcggccggctggacgccg
tccgtccatctgttctcgcagtcgcgcggcaaagtggccttcgatgcagaaagccagcgt
ttcctgcccggctcctatgcgcaggactgcctctcggtcggcgcctgcaacggcaccgac
gatctgcagcggacgatcgaggaatcgcttgccgccggcgagctgatggcgcaggccacc
ggcagaagcagcggcgagaagatcgcaatttcggccgaacaggcctatgactggacgggc
ggcatgatcggcgcggccgaaggcgccgggccgaagaccaacgccaaggccttcatcgat
ttccagcatgacgtctgcgccaaggatatccgccttgccgtgcgcgagggcatgcattcc
atcgagcatatcaagcgcttcacgaccaacggcatggcctcggaccagggcaagctgtcc
aacatgcatggcctggcgattgccgccgaaatgctcggcaaggaaatcccgcaggtcggg
cttaccaccttccgtgcgccctatacgccggtcacctatggtacgctgatcggtcattcg
cgcggagagctgttcgatccgacgcgcaagacgccgctgcacggctgggaagaagcccat
ggcgcggtcttcgaggatgtcggcaactggaagcgtgcctggttctatccgcaggctggc
gagaccatgcatcaggcggtttctcgcgaatgccggacggcacgcgaggcggccggtatc
ttcgacgcctcgacgctcggcaagatcgaggtggtggggccggatgcggcggagttcctc
aacctcatctacaccaatgcctgggatacgctgaagcccggcaaggcccgctacggcatc
atgacccgcgaggatggcttcgtttatgacgacggcgttgtcggacgcctggcggacgac
cgtttccatgtgacgaccacgaccggcggtgcgccgcgcgttctgcatcacatggaagat
tacctgcagacggaattcccgcatctgaaggtatggctgacctcggtgaccgaacaatgg
gctgtcatcgccgtgcaggggccgaaggcgcgcgagatcgtcgcgccgctggtcgaaggg
ctcgacctttcgaacgaagccttcccgcatatgagcgttgccgagtgcacggtctgcggc
gtgccggcgcggctcttccgcgtctcgttcaccggcgaaaccggcttcgaaattaacgtc
ccggccgattacggccagtcggtgctcgaagcggtctgggccaatgccgagccgctcggc
gcctgcgtctacggcacggagacgatgcacgttcttcgcgccgagaaaggctacatcatc
gtcgggcaggatacggatgggacggtgacccccgatgacgccgggctttcctgggcggtt
tcgaagaaaaagacggatttcgtcggcattcgcgggttgaagcggccggatctcgtcaag
gacgggcgcaagcagctcgtcggcctcgtcaccaaggacccgaagctggtgctcgaagaa
ggcgcgcagatcgtcgcgagcccgaacgagccgaagccgatgaccatgctcggccacgtc
acatcagcctattggtcggaaaattgcggccggtcgatcgccttcgcgctcgtcgccggc
ggccgggcgcggatgggcgagacgctttatgtgccgatgccggaccggacgatcgccgtc
gaagtgacggatcttgtattctttgacaaggaagggggccgcatccatggctga
DBGET
integrated database retrieval system
