Rhizobium johnstonii: pRL110085
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Entry
pRL110085 CDS
T00402
Name
(GenBank) putative cycloisomerase
KO
K01857
3-carboxy-cis,cis-muconate cycloisomerase [EC:
5.5.1.2
]
Organism
rle
Rhizobium johnstonii
Pathway
rle00362
Benzoate degradation
rle01100
Metabolic pathways
rle01120
Microbial metabolism in diverse environments
rle01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
pRL110085
Enzymes [BR:
rle01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.2 3-carboxy-cis,cis-muconate cycloisomerase
pRL110085
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GFIT
Motif
Pfam:
Lyase_1
Motif
Other DBs
NCBI-ProteinID:
CAK03027
RhizoBase:
pRL110085
UniProt:
Q1M6V2
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Position
pRL11:complement(99878..100924)
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AA seq
348 aa
AA seq
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MTASPFDHPFLSGLLGDNEIAPYFSAEADIRAMLSFEAALAKAEAAHGLIPAEAARRIAE
TCAAFSPEVSNLRSATARDGVVVPDLIKQLRASVGEEAAKSLHFGATSQDIIDTSLMIRL
KAVVFLFAGRLSTIAAGLHALDGQFGRNKLIGHTRMQAAIPITVSDRLRAWREPLATYRD
RLTEQGFPVQFGGAAGTLDKLGSQAATIRASLAQELGLTDAPQWQSGRLPIADIAGLFAS
ISGSLGKMGQDIALLAQAGDEIEISGGGTSSAMAHKQNPVSAEVLISLARFNATLLSGIH
QSLVHEQERSGAAWTLEWLLLPQMTMATAASLRLAKELTGNIKRLGTT
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcatcgcccttcgaccatcctttcctttccggcctgctcggcgacaacgaaatc
gcgccctatttctctgccgaggcggatatccgggccatgctctccttcgaggccgcgctc
gccaaggctgaagccgctcatggcctgatccctgccgaagccgcaaggcgcatcgctgaa
acttgcgctgccttctcgcccgaagtctccaatcttcgatcggcaacggcaagggacggc
gtcgtcgttcccgatctcatcaagcagctgcgcgctagtgtcggcgaggaagcggcaaaa
agcctgcatttcggcgccaccagccaggatatcatcgataccagcctgatgatccgcctg
aaggccgtcgtctttctgtttgccggccggctttccaccatcgccgcggggctccatgcg
ctggacggccagttcggccggaacaagctgatcggccatacccgcatgcaggcggcgatc
ccgattaccgtctccgaccgcctccgtgcgtggcgggagccgctggcgacctatcgcgac
cgcctgaccgagcagggttttcccgttcagttcgggggcgcggccggcacgctggacaag
ctcgggtcgcaggccgcgacaatccgtgcctccctcgcccaggaactcggcctcaccgat
gcaccacaatggcagagcgggcgtctgccgatcgccgatattgccgggctgttcgcgtcg
atatcgggcagtctcggcaagatgggccaggatatcgcgctgcttgcccaggccggcgat
gaaatcgaaatctcaggtggcggcacctcgtcggccatggcgcacaaacagaatcccgtt
tccgccgaagtcctcatctcgctcgcgcgcttcaacgccactcttctatcgggcatccac
cagtcccttgtgcacgaacaggaacgctccggcgctgcctggacgctcgaatggctgctg
ctgccgcaaatgacgatggcaaccgccgccagcctgcgactggcgaaggagctgacgggg
aatatcaagaggcttggaacgacctga
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