Rhizobium johnstonii: pRL110416
Help
Entry
pRL110416 CDS
T00402
Symbol
rhaI
Name
(GenBank) putative rhamnose isomerase with a role in competition for nodulation
KO
K01820
L-rhamnose isomerase / sugar isomerase [EC:
5.3.1.14
5.3.1.-]
Organism
rle
Rhizobium johnstonii
Pathway
rle00040
Pentose and glucuronate interconversions
rle00051
Fructose and mannose metabolism
rle01100
Metabolic pathways
rle01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
pRL110416 (rhaI)
00051 Fructose and mannose metabolism
pRL110416 (rhaI)
Enzymes [BR:
rle01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.14 L-rhamnose isomerase
pRL110416 (rhaI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
DUF6074
Motif
Other DBs
NCBI-ProteinID:
CAK03369
RhizoBase:
pRL110416
UniProt:
Q1M5X0
LinkDB
All DBs
Position
pRL11:452228..453520
Genome browser
AA seq
430 aa
AA seq
DB search
MTESRIAPDLVATDNDKRATALKADYEALGATLARRGVDIEAVTRQVAEFFVAVPSWGVG
TGGTRFARFPGTGEPRGIFDKLDDCAVINQLTQATPNVSLHIPWDKADASELKAKGNALG
LGFDAMNSNTFSDAPGQAHSYKYGSLSHTDAATRAQAVEHNLECIEIGKALGSKALTVWI
GDGSNFPGQSHFTKAFERYLASMADIYKALPDDWKLFSEHKMYEPAFYSTIVQDWGTNYL
IAQTLGPKAYCLVDLGHHAPNTNIEMIVARLIQFGKLGGFHFNDSKYGDDDLDAGAIDPY
RLFLVFNELVDAEQRGVNDFNPAHMIDQSHNVTDPIESLINSANEIRRAYAQALLVDRKA
LSGYQDDNDALMASETLKRAYRADVEPILAEARRRAGGAIDPIAVYRASGYRRQVAAERP
ASAAGGGGII
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgacagaatccaggattgcgccagatttggtcgcgactgataacgacaagcgggcaacc
gcgttgaaagccgattacgaggcactgggcgcgacgcttgcccgtcgcggtgtcgatatc
gaggcggtcacccggcaagttgcggaattcttcgttgcggttccctcctggggcgtcggc
accggcggcacgcgttttgcccgtttccccggcaccggcgaaccgcgcggcatcttcgac
aagctcgacgattgcgccgtcatcaaccagctgacgcaggcgactccgaacgtctcgctg
catattccctgggacaaggcggatgccagcgaattgaaggccaagggtaacgcgctcggc
ctcggcttcgatgcgatgaattcgaacaccttttccgatgcgcccggccaggcccattcc
tacaaatacggctcgctcagccacaccgatgcggcgacgcgtgcgcaggcggtcgagcac
aatctcgaatgcatcgagatcggcaaggcgctcggctccaaggcgctgacggtctggatc
ggcgacggctcgaacttccccggccagagccatttcaccaaggctttcgagcgttacctt
gcctcgatggcggatatttacaaagcgctgcccgacgattggaagctgttttccgagcac
aagatgtacgagccggccttctattcgaccatcgtgcaggattggggcaccaactatctg
atcgcccagacgctcggccccaaggcctattgcctcgtcgatctcggccaccacgcgccg
aacaccaatatcgagatgatcgtcgctcggctcatccagttcggcaagcttggcggtttc
cacttcaacgattcgaaatatggcgatgacgatctcgacgctggcgcgatcgatccctac
cggctgttcctcgtcttcaacgaactggttgacgccgagcagcgcggcgtcaacgatttc
aacccggcccatatgatcgaccagtcgcacaatgtcaccgacccgatcgaaagcctgatc
aacagcgccaacgaaatccgccgcgcctatgcgcaggcactgctcgtcgaccgcaaggcg
ctctccggctaccaggacgacaacgacgcgttgatggcgtcggaaacgctgaagcgcgcc
tatcgtgccgatgtcgagccgattctggctgaagcccgccgcagggccggcggcgcgatc
gacccgatcgccgtctaccgcgccagcggttatcgcagacaagtggcggccgagcgtccg
gcctccgcagccggtggcggcggcatcatctga
DBGET
integrated database retrieval system
