Roseobacter litoralis: RLO149_c028190
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Entry
RLO149_c028190 CDS
T01572
Name
(GenBank) putative C-5 cytosine-specific DNA methylase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
rli
Roseobacter litoralis
Pathway
rli00270
Cysteine and methionine metabolism
rli01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rli00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
RLO149_c028190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rli03000
]
RLO149_c028190
03032 DNA replication proteins [BR:
rli03032
]
RLO149_c028190
03036 Chromosome and associated proteins [BR:
rli03036
]
RLO149_c028190
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
rli02048
]
RLO149_c028190
Enzymes [BR:
rli01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
RLO149_c028190
Transcription factors [BR:
rli03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
RLO149_c028190
DNA replication proteins [BR:
rli03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
RLO149_c028190
Chromosome and associated proteins [BR:
rli03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
RLO149_c028190
Prokaryotic defense system [BR:
rli02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
RLO149_c028190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
HTH_29
HTH_28
HTH_23
HTH_31
HTH_17
HTH_3
HTH_8
HTH_Tnp_1
Motif
Other DBs
NCBI-ProteinID:
AEI94779
UniProt:
F7ZG48
LinkDB
All DBs
Position
complement(2878112..2879344)
Genome browser
AA seq
410 aa
AA seq
DB search
MTEFELLLQKTGHSVAEAAKILGYSEGHIYRWKRGEETPREGVMNLLRMEVDARQPETSD
AAFSFIDLFAGIGGLRKAMESAGGRCVFTSEWDRFAQQTYDANFPDNRPIAGDITEIDAE
ELPEHDVLVAGFPCQPFSIAGVSKKNALGRAHGFNDETQGTLFFDVLRILKHHRPAAFML
ENVKNLRSHDKGRTFQVIMRKLRDELGYYVPEPRVIDAAHFVPQHRERIVIVGFREDVPF
SFDDVILPPHRERRMRDILHPENGNENPESHFTLGNDAAVSGKYTLSDKLWKYLQDYAAK
HKAKGNGFGFGLVDGDSIARTLSARYYKDGSEILVSRGEGNNPRRLTPRECARLMGYPED
FRIPVSDTQAYKQFGNSVAVPVFAEVARVMEPHVRSILQGQGASPVRKVG
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaattcgaactactgttacagaaaacagggcattcagtcgccgaagctgcaaag
attctcggctattctgaagggcatatctaccgctggaaacgtggtgaggaaaccccgcgc
gaaggtgtaatgaaccttcttcgtatggaagtcgatgcgcgtcagccggagacttccgat
gcggcgttttcctttatcgatctgttcgcggggattggcgggctgcgcaaagctatggag
agcgcaggcgggcgttgcgtgttcacctcagaatgggatcggttcgcccagcagacctat
gatgccaatttcccggacaaccgcccgattgccggggacataactgaaatcgacgccgaa
gagcttcccgaacatgacgtgctggtcgcgggctttccctgtcagccgttttcaattgca
ggggtatcgaaaaagaacgcccttggccgcgctcatggctttaatgatgagacccagggc
acgctgttttttgatgtgctgcggatcctcaaacatcaccgcccagccgccttcatgctt
gagaatgtgaagaacctgcgcagtcatgacaaaggccgtacgttccaggtcatcatgcgt
aagctgcgggatgagcttggctactatgtgccggagccacgcgtcattgatgccgcgcat
ttcgtgcctcagcaccgcgaacggatcgtcattgtgggcttccgcgaagacgtgccgttc
agttttgatgatgttatattgccaccccaccgggagcgccgcatgcgggacatcctgcac
ccggagaacgggaatgagaacccagagagccatttcaccctcggcaatgacgctgccgtc
agcggcaaatacaccctgtctgacaagctctggaaatacctgcaggactatgcggcgaag
cacaaagccaagggaaacgggtttggcttcgggctggtggatggcgacagcatcgcccgc
accttgtctgcccggtactacaaggatggttcggaaatcctcgtaagccgcggcgaaggc
aacaatccgcgccgcctgaccccgcgcgaatgtgcccgactgatgggctatccggaagat
ttccggatccctgtctcagatacccaggcctataaacagttcggcaactcggtggctgtt
cctgtctttgctgaggttgcccgggttatggagccgcacgtccggtcaattctgcaaggg
cagggggccagcccggtccgaaaagttggctga
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