Roseobacter litoralis: RLO149_c040370
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Entry
RLO149_c040370 CDS
T01572
Name
(GenBank) MiaB-like rRNA modifying enzyme
KO
K18707
threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:
2.8.4.5
]
Organism
rli
Roseobacter litoralis
Brite
KEGG Orthology (KO) [BR:
rli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rli03016
]
RLO149_c040370
Enzymes [BR:
rli01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
RLO149_c040370
Transfer RNA biogenesis [BR:
rli03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
RLO149_c040370
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
B12-binding
Motif
Other DBs
NCBI-ProteinID:
AEI95933
UniProt:
F7ZEN7
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All DBs
Position
4084079..4085332
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AA seq
417 aa
AA seq
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MSAPKFTTLGCRLNAYETEAMKELAAQSGLSDAVVVNTCAVTGEAVRKARSTIRKLRREN
PSARLIVTGCAAQTEPQTFAAMPEVDAVIGNTEKMQGDTWNALAADFIGESEAVQVDDIM
SVTETAGHLIDGFGTRSRAYVQVQNGCDHRCTFCIIPYGRGNSRSVAAGVVIDQIKRLVD
KGFNEVVLTGVDLTSWGADLPAAPKLGDLVMRILRLVPDLPRLRISSIDSIEVDENLMLA
IATEPRLMPHLHLSLQHGDDMILKRMKRRHLRDDAIRFAQDARRLRPDMTFGADIIAGFP
TETDAMFENSLALVQECDLTWLHVFPYSARPGTPAARMPAVHGQIIKERASQLRAAGDAQ
VQRHLSAQVGKTHSVLMESPVMGRTEQFTEVQVSTPQSEGTIVSLRVEGTVGAALQA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccccaaagttcacgaccttgggctgccgtttgaatgcctatgaaaccgaagcg
atgaaagagctcgccgcgcagtcgggactttcggatgctgtggttgtcaacacctgtgcg
gtaaccggcgaagcggtgcgaaaagcgcgcagcacaatacgtaaactgcgccgggaaaac
ccgtccgcacgccttatcgtgaccggctgcgccgctcagacggagccgcagacgtttgcg
gcgatgcccgaagtcgatgctgtcattggtaacaccgaaaagatgcagggcgacacatgg
aacgcgctggccgcggatttcataggcgaaagtgaagcggtgcaggtcgatgacatcatg
tctgtgaccgaaacggcaggtcatcttattgacgggtttggcacccgcagccgtgcgtat
gttcaggtgcaaaacggatgcgaccatcgctgcacattttgcatcatcccttatggccga
ggcaactcgcgttcggtagctgccggtgttgtaatcgatcagatcaaacgtctggtggac
aaaggcttcaacgaagtcgtcctgacgggcgtggatctgacaagttggggggcagatcta
ccggctgcgccaaaacttggtgatctggtgatgcgcatcctcaggcttgtaccggattta
ccgcgtctgcggatcagctcaattgacagtatcgaagttgacgaaaacctgatgctggcc
attgccaccgaaccgcggttgatgccacatttgcacctgtcattgcagcacggtgatgac
atgatcctgaaacggatgaaacggcggcatttgcgggatgacgccatccgtttcgcacag
gatgcgcggcggttgcgtccggatatgacttttggcgctgatatcattgcgggtttcccg
accgaaactgacgcgatgttcgaaaactctctggcattggtacaggaatgcgacctgacc
tggctgcatgtttttccctactccgcacgccccggtacgcccgccgcacggatgccagcg
gtgcatggtcagatcatcaaggaacgtgcgtcgcagttgcgtgctgctggtgatgcgcaa
gtgcaacgacatctctccgctcaggtgggtaaaacgcacagcgttctaatggaaagcccc
gttatgggtcgtaccgaacagttcaccgaggttcaggtgtcgacacctcaaagcgaaggt
acgattgtctcgctgcgcgttgaagggaccgtcggcgccgcattgcaggcatag
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