Rhizobium lusitanum: HB780_32105
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Entry
HB780_32105 CDS
T07787
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
rls
Rhizobium lusitanum
Pathway
rls00190
Oxidative phosphorylation
rls03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rls00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
HB780_32105
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HB780_32105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rls03019
]
HB780_32105
Enzymes [BR:
rls01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
HB780_32105
Messenger RNA biogenesis [BR:
rls03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HB780_32105
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
RE_NgoFVII
PLDc
Motif
Other DBs
NCBI-ProteinID:
QND50110
LinkDB
All DBs
Position
3769774..3771975
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AA seq
733 aa
AA seq
DB search
MDSAVTEHQDANQPAPEATPPINELLSSPERFINREFSWLQFNRRVLEETLNTAHPLLER
IRFLSISAGNLDEFFMVRVAGLEGQVRQKILVRTPDGKTPAEQLDDILREIDNLQMEQQA
SLAVLQQYLAKEDILIVRAPALSETDRVWLANEFEQAIFPVLTPLSIDPAHPFPFIPNLG
FSIALQLDSMNGREPMTALLRLPPALDRFVRLPDASNVIRYITLEDVVNIFIQRLYPGYE
VKGSGTFRLIRDSDIEVEEEAEDLVRFFETALKRRRRGSVIRIETDSEMPLELRQFVVES
LNVPENRIAVLPGLLALNTLSEICKAPRDDLRFEPYNARFPERVREHAGDCFAAIREKDM
VVHHPYESFDVVVQFLIQAARDPDVLAIKQTLYRTSNDSPIVRALIDAADLGKSVTALVE
LKARFDEEANIRWARDLERAGVQVVFGFIELKTHAKMSMVVRREDGKLRTYCHLGTGNYH
PVTAKIYTDLSYFTCDPKIAHDMANIFNFITGYGEPEQSTKIAVSPYTLRPRILQHIEEE
IEHAKSGKPAAIWMKMNSLVDPDIIDALYRASNAGVEIDLVIRGICCLRPQVPGLSENIR
VKSIIGRFLEHSRIFCFGNGQGLPSDKALVYIGSADMMPRNLDRRVETLVPLTNKTVHEQ
VLSQIMLGNIIDNQQSYEILPDGTSRRTEVRAGKEPFNAQQYFMTNPSLSGRGESLKSSA
PKLIAGLLSGRKK
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggactcggcagtaacggaacatcaggacgccaatcagccagccccggaggccacgccg
ccgatcaacgagttgctgagcagccccgaacgcttcatcaaccgtgaattctcctggctg
cagttcaatcgccgcgtcctcgaggaaacgctgaacacggcgcatccgcttctggagcgc
atccgcttcctctcgatttccgccggcaatctcgatgaattcttcatggtgcgcgtcgcc
ggcctcgagggccaggtccgccagaagattctcgtgcgcacgccggatggcaagacgccc
gccgaacagctcgacgatatcctgcgagaaatcgacaatctgcagatggagcagcaggca
tcgcttgccgtgttgcagcagtatctcgccaaggaagacattctgatcgtccgcgcgccg
gctctctccgagaccgaccgggtgtggctcgccaatgaattcgaacaggcgatcttcccg
gtcctgacgccgctctccatcgatccggcgcatccgttcccattcattccgaacctcggc
ttctcgatcgcgctacagctggacagcatgaatggccgcgagccgatgaccgcgttgctg
cgcctgccgccggcgctggaccgtttcgtccgcctgccggatgccagcaacgttatccgc
tacatcacgctcgaagatgtcgtgaacatcttcattcagcgtctctatcccggctacgag
gtaaagggttcgggcaccttccgcctcatccgcgacagcgatatcgaagtcgaggaagaa
gccgaagatctggttcgcttcttcgagacggctctgaagcgccgccgccgtggctctgtg
atccgcatcgagaccgactcggagatgccgctcgagctgcgccagtttgtggtggaatcg
ctgaacgtgccggaaaaccgcatcgccgttctgccgggcttgctggcgctcaataccctg
tccgagatctgcaaggcgccgcgcgacgatctgcgcttcgagccatacaatgcccgattt
cctgagcgcgtccgcgaacatgccggcgactgcttcgccgccatccgcgaaaaggacatg
gtggtccaccatccttacgaatctttcgacgtggtggtccagttcctgattcaggctgcg
cgcgatcctgacgttctggcgataaagcagacgctttatcgtacctccaacgatagcccg
atcgtgcgtgcgttgatcgacgccgccgatctcggcaagtcggtgactgcgctggtcgag
ctcaaggcgcgcttcgacgaagaagccaacattcgttgggcacgcgatctggagcgtgcc
ggtgtgcaggtggtcttcggttttatcgagctcaagacgcatgcgaagatgtcgatggtc
gtgcgccgtgaagacggcaagctgcgcacctattgccacctcggcacgggtaactaccac
ccggtcaccgccaagatctacaccgatctgtcctacttcacctgcgacccgaagatcgcc
catgacatggcgaacatcttcaacttcatcaccggctatggtgagccggagcagagcacg
aagatcgccgtttcgccctatacgctgcgcccgcgcatcctccagcacatcgaggaggaa
atcgagcacgccaagagcggcaagccggcggcgatctggatgaagatgaattcgttggtc
gaccccgacatcatcgacgcgctttatcgcgccagcaacgccggcgtcgagatcgatctc
gtcatacgcggcatctgctgcctgcgtccgcaggtaccgggcctgtccgagaatatccgc
gtcaagtcgatcatcggccgcttcctcgagcacagccgcatcttctgtttcggcaatggc
cagggcctgccctcggacaaggcgctcgtctatatcggctcggccgacatgatgccgaga
aacctcgatcgacgtgtcgaaaccctcgttccgctgaccaacaagaccgtgcacgagcag
gttctttcacagatcatgctgggcaacatcattgacaatcagcagagctacgagatattg
ccggacgggacttcgaggcgtaccgaggtgcgcgcggggaaagagccgttcaacgcgcag
cagtatttcatgaccaatcccagcctgtccggccgtggtgaatcgctgaaatccagtgcg
ccgaaactgatcgccgggctgttgtcgggccgcaagaaataa
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