Candidatus Ruthia magnifica (Calyptogena magnifica): Rmag_0274
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Entry
Rmag_0274 CDS
T00438
Name
(GenBank) succinyldiaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
rma
Candidatus Ruthia magnifica (Calyptogena magnifica)
Pathway
rma00300
Lysine biosynthesis
rma01100
Metabolic pathways
rma01120
Microbial metabolism in diverse environments
rma01230
Biosynthesis of amino acids
Module
rma_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rma00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Rmag_0274
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rma01002
]
Rmag_0274
Enzymes [BR:
rma01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
Rmag_0274
Peptidases and inhibitors [BR:
rma01002
]
Metallo peptidases
Family M20
Rmag_0274
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
ABL02056
UniProt:
A1AVU9
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All DBs
Position
299609..300739
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AA seq
376 aa
AA seq
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MNKTLKLAKNLVSIDSITPQDKGCQSIMTNHLSHLNFKITDLKFGEVDNFWAIRGHQSPV
FVFAGHTDVVPVGDELKWHISPFSAQVQDGMLHGRGTADMKGSLAAMLSATDRFVKDYPN
HKGSIGYLITSDEEGPATDGTVKVAKYLKEINQIVDYCLVGEPSATNELGDVIKNGRRGS
LNGILKIIGKQGHIAYPHLADNPIHLAISALNDLCNEVWDKGNEYFPATSFQISNIHSGT
GVTNIIPGESDVVLNFRYSTQNTHKQLQSRVCVILNKHNFEYQITWEHSGYPFLTPKGKL
VNACTNAIKTVKNINTQLSTSGGTSDGRFIALILKAQVVELGPLNATIHQVDECVSIQDL
EDLSDIYYHVLKNILT
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaccttaaaattagcaaaaaatcttgttagtatagattctattaccccacaa
gataagggttgtcagtctattatgaccaatcatttgagccatcttaattttaaaattacc
gatttaaaatttggtgaggttgataatttttgggcaattcgcggtcatcaatctcctgtg
tttgtgtttgcagggcataccgatgtcgtgcctgtgggtgatgagctaaaatggcacata
tcacctttttctgcccaagttcaagatggtatgttgcatggtcgtggaacagctgacatg
aaaggttctttggcagctatgcttagtgcaaccgatagatttgttaaagattatcctaat
cataaaggctcaatcggctatttaatcacttctgatgaagaaggtcctgctactgatggc
actgttaaagttgcgaagtacttaaaagaaatcaatcaaatcgttgattattgtttagtg
ggtgagccatcagccactaatgaattaggagatgtaattaaaaatggtcgtcgtggctct
ttaaatggcattttaaaaatcattggtaaacaagggcatattgcttatccacatttggca
gataatcctatccatctagccatatcagcgttaaatgatttgtgtaatgaggtttgggat
aagggcaatgagtattttccagcaaccagttttcaaatttctaatatccattcaggcaca
ggggtgactaacattattccaggtgaaagtgatgttgttcttaactttcgttattctaca
cagaatactcacaagcaattgcaaagccgagtttgcgtgattttaaacaagcataatttt
gaatatcaaattacttgggaacattctggctatccatttttaaccccaaagggtaaattg
gttaatgcttgtactaatgcgattaaaaccgtcaaaaatataaacacccaactctccact
tcaggcggtacctctgatggacgttttattgcactaattttaaaggctcaagtggtagaa
ctaggtcctttaaatgccaccattcaccaagttgacgagtgtgtatccatccaggattta
gaagatttgagcgatatttattatcatgttttaaaaaatatactcacttaa
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