Roseicyclus marinus: MACH21_23410
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Entry
MACH21_23410 CDS
T09703
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
rmai
Roseicyclus marinus
Brite
KEGG Orthology (KO) [BR:
rmai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rmai03009
]
MACH21_23410 (rimO)
Enzymes [BR:
rmai01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
MACH21_23410 (rimO)
Ribosome biogenesis [BR:
rmai03009
]
Prokaryotic type
ribosomal protein modification factors
MACH21_23410 (rimO)
BRITE hierarchy
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
BDW86164
UniProt:
A0AA48H434
LinkDB
All DBs
Position
2468322..2469689
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AA seq
455 aa
AA seq
DB search
MSQNPPQLRPDLARAEVPDTARPGQPRIGMVSLGCPKALVDSERILTRLRAEGYAISPDY
AGAEAVIVNTCGFLDSAKVESLEAIGEALRENGRVIVTGCLGAEPEYITGAHPSVLAVTG
PHQYEQVLDAVHAAVPPAPDPFIDLLPPAGVKLTPRHYSYLKIAEGCDHKCKFCIIPDMR
GRLQSRPAKAVLREAEKLVEAGVKELLVISQDTSAYGTDWKGRDSKFPILDLSRDLSTLG
AWIRLHYVYPYPHVRDLIPLMADPSNGLLPYLDIPFQHAHPDTLRRMARPAAASRTLDEI
AAWRRDCPDITLRSTFIVGYPGETEAEFQTLLDWLEEAQLDRVGCFQYENVAGARSNALP
DHVPEEVKQDRWDRFMQKAQAISEAKLAAKVGRNLTVLVDAVDEDGATCRTMSDAPEIDG
NLFIDEGFDGLAPGDMVEVEVEEAGEYDLWGRIRA
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaacccgccccagctacgccccgacctcgcccgcgccgaggtgcccgacacc
gcccgccccggacaaccccggatcggcatggtcagtcttggctgtcccaaggcgctggtg
gacagtgaacgcatcctgacccggctgcgcgccgaaggctacgcgatctcgcccgattac
gcgggcgcggaggccgtcatcgtgaacacctgcgggttcctggacagcgccaaggtcgaa
agcctcgaggcgatcggcgaggcgctgcgcgaaaacggtcgggtgatcgtgaccgggtgc
ctgggcgccgagccggagtatatcaccggcgcgcatccctcggttctggcggtgacgggc
ccgcatcaatacgagcaggtgctcgatgcggtccatgccgccgtaccgcccgcgcccgat
ccgttcatcgaccttttgccgcctgcaggcgtcaagctgacgccgcgccattacagctat
ctcaagatcgccgaaggctgcgatcacaagtgcaagttctgcatcattcccgacatgcgt
ggccgtctgcaatcgcgcccggccaaggccgttctgcgcgaggccgaaaagctggtcgag
gcaggcgtgaaagagcttctggtgatcagccaggacacgagcgcctatggcacggactgg
aaagggcgcgacagcaagtttccaattctcgatctatccagagatttatccacattgggt
gcctggattcgcttgcactatgtctatccctacccgcatgtgcgcgatctgatcccgctg
atggctgacccctcgaacgggcttttgccctatctcgacatcccgttccagcacgcccat
cccgacacgctgaggcgcatggcgcggcccgccgctgcctcgcgcacgctggatgaaatc
gcggcatggcggcgcgactgtcctgacatcacgctgcgctccaccttcatcgtgggctat
cccggcgagacggaggcggaattccagaccctgctcgactggctggaggaggcgcagctc
gatcgcgtgggctgcttccaatacgagaatgtcgcgggtgcccggtcgaacgccctgccc
gatcatgtgcccgaagaggtcaagcaggatcgctgggaccgtttcatgcaaaaggcgcag
gccatttccgaagcaaagctcgcggccaaggtcgggcgcaatctgacggtgctggtcgat
gccgtggacgaggacggcgcgacctgccggaccatgtcggacgcacccgagatcgacggg
aaccttttcatcgacgagggattcgacgggcttgcccccggcgacatggtcgaggtcgag
gtggaagaggccggggaatacgacctttggggccgcatccgcgcttga
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