KEGG   Rhopalosiphum maidis (corn leaf aphid): 113553502
Entry
113553502         CDS       T06065                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
rmd  Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03020  RNA polymerase
rmd03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rmd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    113553502
  09124 Replication and repair
   03420 Nucleotide excision repair
    113553502
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rmd03021]
    113553502
   03400 DNA repair and recombination proteins [BR:rmd03400]
    113553502
Transcription machinery [BR:rmd03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     113553502
DNA repair and recombination proteins [BR:rmd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      113553502
SSDB
Motif
Pfam: TFIIS_C RNA_POL_M_15KD Zn_ribbon_recom Ogr_Delta TF_Zn_Ribbon CpXC DUF35_N
Other DBs
NCBI-GeneID: 113553502
NCBI-ProteinID: XP_026812666
LinkDB
Position
2:34519970..34521146
AA seq 130 aa
MSGYDSRSDGPGFVGIRFCQECNNMLYPKEDKEHKVLLYACRNCDHRQMADSNCIYVNKI
MHEINELTHIVSDVTSDPTLPRSEDHPCPKCKHRESVFFQAQTRRAEEEMRLYYVCTNPH
CIHRWTESSI
NT seq 393 nt   +upstreamnt  +downstreamnt
atgtcgggttacgattcccggagtgatggacctggatttgtcggcattcgattctgccaa
gaatgcaataacatgttgtatcctaaagaagacaaggaacataaagtactgttgtacgct
tgtcgaaattgtgatcacagacaaatggcagacagcaattgtatttatgtgaataaaatt
atgcacgaaatcaatgaactcactcatattgtttccgatgtaacgtctgatccaacttta
cccaggtcagaagatcatccttgtccaaaatgtaaacaccgtgaatctgtattttttcaa
gctcaaactagacgtgcagaggaggaaatgagattatattatgtttgtaccaatcctcat
tgcatacatcgttggactgaatcgtctatttaa

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