Cupriavidus metallidurans: Rmet_0728
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Entry
Rmet_0728 CDS
T00351
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding protein
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
rme
Cupriavidus metallidurans
Pathway
rme00540
Lipopolysaccharide biosynthesis
rme01100
Metabolic pathways
rme01250
Biosynthesis of nucleotide sugars
Module
rme_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
rme00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Rmet_0728 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rme01005
]
Rmet_0728 (rfaD)
Enzymes [BR:
rme01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
Rmet_0728 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
rme01005
]
Core region
Rmet_0728 (rfaD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
NAD_binding_10
KR
adh_short
LAMININ_IV_B
Motif
Other DBs
NCBI-ProteinID:
ABF07614
UniProt:
Q1LQG2
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All DBs
Position
805508..806503
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AA seq
331 aa
AA seq
DB search
MTIIVTGAAGFIGSNIVKGLNERGETNIIAVDNLTRAEKFNNLVDCEIADYLDKTDFVAR
FARGDFGNVRAVFHEGACSDTMETDGRYMMENNYRYTLALLEACLEQGAQFLYASSAATY
GASTMFREDRDYEKPLNVYGYSKFLFDQVVRRRLPSAHSQIVGFRYFNVYGPREFHKGRM
ASVAFHHFNQFRAEGTVKLFGEYNGYAPGTQSRDFVSVEDVVKVNLYFLDHPEKSGIFNL
GTGRSQPFNDIAVSVVNALRESEGKPALSLDEMVQEGLVEYVKFPDALRGKYQCFTQSDV
SRLRGAGYSDQFLTVQEGVSRYCKWLLERSA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcatcgtgaccggcgctgccggctttatcggcagcaacatcgtcaagggcctg
aacgagcgcggcgagacgaacatcatcgccgtggacaacctgacccgcgccgagaagttc
aacaatctcgtcgactgcgagattgccgactacctggacaagaccgacttcgtcgcccgc
ttcgcgcgcggcgatttcggcaatgtccgcgcggtattccatgagggcgcctgctccgac
acgatggagaccgacggtcgctacatgatggagaacaactaccgctacacgcttgccttg
ctggaggcgtgcctggagcagggtgcccagttcctgtacgcgtcgtcggcggccacttat
ggcgcttcgacgatgtttcgcgaggaccgtgactacgaaaagccgctgaacgtctacggc
tactccaagttcctgtttgaccaggtggtgcgccgtcgcctgccttccgcccattcgcag
atcgtgggcttccgctacttcaacgtctacgggccgcgcgaattccacaagggccgcatg
gcgtcggtggcgttccatcacttcaaccagttccgcgccgaaggtacggtcaagctgttt
ggcgagtacaacggctatgcgccgggcacgcagagccgggacttcgtgtccgtggaggac
gtggtcaaggttaatctgtacttcctggaccatcccgagaagtccggcatcttcaacctc
ggtactgggcggtcgcagccgttcaacgacatcgccgtctcggtggtcaatgcgctgcgc
gagtcggaaggcaagccggcgctctcgctcgatgaaatggtgcaggaagggctggtcgag
tacgtcaagttccctgatgccctgcgtggcaagtatcaatgcttcacgcagtcggatgta
tcgcgcctgcgtggggctggctacagcgaccagttcctgaccgtgcaggaaggcgtcagc
cggtactgcaagtggctgctggagcgaagcgcctaa
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