Cupriavidus metallidurans: Rmet_2178
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Entry
Rmet_2178 CDS
T00351
Symbol
ppk
Name
(GenBank) polyphosphate kinase, component of RNA degradosome
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
rme
Cupriavidus metallidurans
Pathway
rme00190
Oxidative phosphorylation
rme03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rme00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
Rmet_2178 (ppk)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Rmet_2178 (ppk)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rme03019
]
Rmet_2178 (ppk)
Enzymes [BR:
rme01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
Rmet_2178 (ppk)
Messenger RNA biogenesis [BR:
rme03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Rmet_2178 (ppk)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
ABF09057
UniProt:
Q1LLB9
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All DBs
Position
2384501..2386582
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AA seq
693 aa
AA seq
DB search
MSTTPPGTLLNRELGILEFNARVLAQAADPNVPLLERLKFICIVSSNLDEFFEIRMAGLK
EQMRENASGLTPDGLSFLQTYQLVTERTQRLVASQYDMLQNVIFPALEQEGVFFHLTSTW
TEQQRAWARDFFVRELGPVLTPIALDPAHPFPRVLNKSLNFVIELSGKDAFGRDADLAIV
QAPRALPRVVRMPEQLSGYPYGFVMLSSFMQAFVHELFPAIEVEGCYQFRVTRNSDLFVS
EDDITDLREALQGELPTRHFGDMVRLEVSSDTPPALTRRLLLESGLTEQDLYRVSGPVNL
ARLMQIPDMVDRPTLKYPPHVPAAVKALPAGSNMFDVIRQRDVLLHHPYESFSSVLDLLQ
LAANDPNVVAIKQTVYRTGNESAVMEALMTAARNGKEVTVVVELLARFDEETNINWAERL
ESVGAHVVYGVVGHKCHAKMLLIVRREPATPKAKHFMLRRYVHLGTGNYHPRTARLYTDF
GLLTAEEKICEDAHHVFQLLTGTAGTIRLNHLWQSPFTMHSNLVEHIRAEARNARAGKRA
RIIAKMNALLEPTIIEELYKASRSGVKIDLIVRGVCALRPGVPGMSENISVRSIVGRFLE
HHRVYYFHAGGDDVLYLSSADWMDRNLFRRVEVAFPILDRTLKARVIKEGLQVHLRDNAS
AWIMQSDGEYVRKPSRAKEQRVSQVELLARFGT
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgacgccgcccggcacgcttctcaatcgcgagttgggcattctggagttcaat
gcgcgcgtactcgcgcaggccgccgaccctaatgttcccctgctggaaaggctgaagttc
atctgtatcgtatccagcaacctggacgaattctttgagatccggatggcgggtctgaag
gaacagatgcgggaaaacgcatcgggcctcacgcccgacggtctctcattcctgcaaacc
taccagcttgtcaccgagcgcacccagcgactggttgcctcgcagtatgacatgctgcag
aacgtgattttccccgcgctggagcaggaaggtgtgttcttccacctgaccagcacctgg
accgagcagcagcgcgcctgggcgcgcgatttcttcgtgcgcgagctgggcccggtgctc
acgcccatcgcgctcgaccctgcccacccgttcccgcgcgtgctcaacaagagcttgaat
ttcgtgatcgaactgtccggcaaggacgcgttcggacgtgatgccgatctcgccatcgtg
caggccccgcgcgcgctgccgcgcgtggtgcgcatgcccgagcagctttcgggatacccg
tacgggttcgtgatgctgtcgtcgttcatgcaggcatttgtgcatgagctgttccccgca
atcgaggtagaaggctgctatcagttccgcgtaacgcgtaattcggacctgttcgtgtcc
gaagacgacattaccgatctgcgcgaagccctccagggcgaactgccgacacgtcacttc
ggcgatatggtccgcctcgaagtgtcgtccgacacgccgcccgcgctgacgcgccggctg
ctgctcgagtctggcctgaccgaacaggatctgtaccgcgtgagcggtccggtaaacctt
gcgcggttgatgcagattcccgacatggtggaccgccctaccctcaagtacccgccccat
gtcccggcagcggtcaaggcacttccagcgggttccaacatgttcgacgtgatccgtcag
cgcgatgtgctgctgcatcatccgtacgagagcttctcgtctgtgctcgacctgctgcag
cttgccgccaacgacccaaacgtcgtggcgatcaagcagactgtctaccggaccggaaac
gaatctgcggtgatggaagcgctcatgaccgccgcccgcaatggcaaggaagtgacggtg
gtggtggaactgctggcgcggttcgacgaggaaaccaacatcaactgggccgaacggctg
gagtcggttggcgcccacgtcgtgtatggcgtggtcggccacaagtgccatgccaagatg
ctgctgatcgtgcgccgcgagccggccacgcccaaggcgaagcacttcatgctgcgccgc
tacgtccaccttggcaccggcaactatcatccgcgcacggcccggctgtacaccgacttc
gggctgctgacggccgaggaaaagatctgcgaagacgcgcatcacgtgttccagcttctg
acgggcaccgccggcacgatccgcctgaatcacctgtggcagtcgccgttcacgatgcac
agcaatctcgtcgagcacatccgtgccgaggcccgcaacgcacgcgcgggcaagcgggcg
cgcatcatcgcgaagatgaacgcgctgctggagccgacgatcatcgaagagctgtacaag
gcatcgcgttccggcgtgaagatcgacctgatcgtgcgcggcgtttgcgcgcttcgccca
ggagtgccagggatgtccgagaacatttcggtacgttcgattgttggccgcttcctcgaa
caccatcgcgtctactacttccatgccggtggtgatgacgtgctgtatctgtcgagcgct
gactggatggaccgcaacctgttccgccgcgtggaggtggccttcccgatactggatcgc
acgctcaaggcacgcgtgatcaaggaaggcctgcaggtgcatctgcgcgacaacgcctcg
gcgtggatcatgcaatcggacggcgagtatgtgcgcaagccatcgcgcgccaaggagcag
cgcgtaagccaggtggagttgctggcgcggttcggtacctga
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