Cupriavidus metallidurans: Rmet_3961
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Entry
Rmet_3961 CDS
T00351
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
rme
Cupriavidus metallidurans
Pathway
rme00250
Alanine, aspartate and glutamate metabolism
rme00310
Lysine degradation
rme00350
Tyrosine metabolism
rme00650
Butanoate metabolism
rme00760
Nicotinate and nicotinamide metabolism
rme01100
Metabolic pathways
rme01120
Microbial metabolism in diverse environments
Module
rme_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
rme00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
Rmet_3961 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Rmet_3961 (gabD)
00310 Lysine degradation
Rmet_3961 (gabD)
00350 Tyrosine metabolism
Rmet_3961 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
Rmet_3961 (gabD)
Enzymes [BR:
rme01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
Rmet_3961 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
Rmet_3961 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
Rmet_3961 (gabD)
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Motif
Pfam:
Aldedh
OmdA
NumbF
Motif
Other DBs
NCBI-ProteinID:
ABF10829
UniProt:
Q1LG97
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All DBs
Position
megaplasmid:complement(520510..521937)
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AA seq
475 aa
AA seq
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MYQDLALYIDGEFIKGGDRREQDVINPATQELLGKLPHATTADLDRALSAAQRAFETWKK
TSPLERSQILRRVAELTRTRAKEIGRDITLDQGKPLAEAVGEVMICAEHAEWHAEECRRI
YGRVIPPRNPAVRQIVVREPIGVCAAFTPWNFPFNQAIRKIVAALGAGCTLILKGPEDSP
SAVVALARLFHDAGLPPGVLNIVWGVPSEVSTYLIESPIVRKISFTGSVPVGKQLAAMAG
AHMKRVTMELGGHSPVLVFGDADIEPAAEMLARFKLRNAGQVCVSPTRFYVQEKAYDKFL
ARFTEVIGSIKVGNGLDDGTQMGPLAHERRIASMEQFLDDASHRGGKIVAGGSRIGDKGF
FFAPTVVTDLPDDAKLMVDEPFGPVAPVTRFKDAEEVLRRANSLPFGLASYVFTNSLKTA
NLVSNGLEAGMVNINHFGMALAETPFGGIKDSGIGSEGGQETFDGYLVTKFITQV
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtaccaggatctcgccctctacatcgatggagaattcatcaagggaggcgaccgccgc
gagcaggacgtcatcaacccggcgacgcaggaactgctcggcaagctgccacacgccacc
actgccgacctggatcgtgcgctgtctgccgcgcagcgcgccttcgaaacctggaagaaa
acgtcgccgctggaacgctcgcagatcctgcgccgcgtagcagaactgacccgtacccgc
gccaaggaaattggccgcgacatcacgctggaccagggcaagccgctggccgaagccgtg
ggcgaagtgatgatctgcgccgaacatgccgaatggcacgccgaggaatgtcgtcgtatc
tacggccgcgtgattccgccgcgcaacccggcggtgcgccagatcgtggtgcgcgagccg
atcggcgtctgcgccgcgttcacgccttggaacttcccgttcaaccaggccatccgcaag
atcgtggctgcgctgggcgccggctgcacgctgatcctgaaaggtccggaagactccccg
agcgccgtggtggcgctggcccgcctgttccacgatgcaggcctgcccccgggcgtgctg
aatatcgtatggggcgtgccgagcgaagtttcgacctatctgatcgaatcaccgatcgtg
cgcaagatctcgttcaccggctcggtaccggtgggcaagcagcttgccgcgatggccggc
gcgcacatgaagcgcgtgacgatggagttgggcggccactcgcccgtgctggtgtttggc
gacgcagacatcgaaccggccgcggaaatgctggcccgcttcaagctgcgcaatgccggc
caggtttgcgtatcgcccacgcgtttctatgttcaggaaaaggcctacgacaaattcctg
gcgcgcttcaccgaggtcatcggctcgatcaaggtcggcaacggcctggacgacggcacc
cagatgggcccgctcgcacacgaacgccgcatcgcgtcgatggagcagttcctggacgat
gccagccatcgcggcggcaagatcgtcgccggcggctcgcgcatcggcgacaagggcttc
ttcttcgcgccgaccgtcgtcacggacctgcccgacgatgccaagctgatggtcgatgaa
ccgttcggcccggtagccccggtcacgcgcttcaaggatgcggaagaagtgctgcgccgc
gccaacagcctgccgttcggcctggcctcgtatgtcttcaccaactctctgaagacggcc
aaccttgtatcgaacggacttgaagccggcatggtcaacatcaaccacttcggcatggcg
ctggccgagaccccgtttggcggcatcaaggattcgggaatcggcagcgaaggtggccag
gagaccttcgacggttacctggtgaccaagtttattacccaggtttga
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