Rhipicephalus microplus (southern cattle tick): 119159974
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Entry
119159974 CDS
T07403
Name
(RefSeq) Fanconi anemia group J protein homolog isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03440
Homologous recombination
rmp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119159974
03460 Fanconi anemia pathway
119159974
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rmp03400
]
119159974
Enzymes [BR:
rmp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
119159974
DNA repair and recombination proteins [BR:
rmp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
119159974
FA (Fanconi anemia) pathway
Downstream FA components
119159974
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
nSTAND_NTPase5
Myb_Cef
Motif
Other DBs
NCBI-GeneID:
119159974
NCBI-ProteinID:
XP_075746079
LinkDB
All DBs
Position
3:90110117..90169609
Genome browser
AA seq
1181 aa
AA seq
DB search
MDVKAESSAKKEPLYIESHAVYFPHTPYQSQKMVIIKVLQGLRNGRNCLIESPTGSGKTL
ALLCSCLAWQKKKKEIHQAQVEKMMQAMQARHHEFEDTGSYDPRCSAVPLGGASCKGSRV
HGCAKPVTPLKEQQPQPTKPWSYKLEGPPPANGPSCPLVALEGASCIGSKVDDGGSHTTP
SKVPQSPLVKPWQYNLEGPPPKDAACSLVALDGAACIGSKVYDERGLCDTPLKEEQAAEA
AELLSYYVATPSPSGVTRACKLSLKANSPCRVVTSGAVQSPRQQVVSAQPVVASPAVASA
SQASTVASPTVPAALATHLPVAPGDLLPANVKPGTEYMVVRNTTGQMLDLNTLLSLPELK
TNKDTIVAQASQVTPAKQQAVGKPVKVQPVKTPLKSSIPSPMDDDDDDFKPMKKMRQSVN
THIRNSLASLPSPKREDASAVSSAPSTSTVLEQLIQSQQQLPPSEQPTPSKGCQGIADKP
LERVPTIFYGTRTHKQIAQVVRELKKTDYCHVKMCILSSRERTCVHPVVSKSTAKNERCK
ELLEDMTRGQGGCGYYINMKRAPPAPSMEPYDLEDLVKIGKRIRVCPYYWSLDLMPGADI
IFCPYNYLIDPVIRKCLSIDLNNAVVVLDEAHNIEDISREVMSISVTQDQLRDIIADLEE
MQRIPYMPEEHYAIASVMSKLSLWITQHSDHLDDYRGFEQSGKVWAGTEILAFMTDVGLS
PECFKNFKTLVSAITTVEKPSPEMDPEQVLPPTVNAATSATLQNFVIIFDFMYRDDLKYL
GDFRAAMVKAPSKKKQTEASRWLSGGGVGGFNAAWTHSLNFWCLNPAVAMSDIKDKVHSL
IVASGTLTPMESFESELDMPFKSQLQANHVIPREGVWIGSITCGPNNVNLTANFKTAETF
EFQDEIGSILWDICKAVPYGVLCFFPSYGMMNKLSQRWQNTGMWGKLERLKHIAMEPQKA
DSDSFDCTMNEYFNHALGKYSDGYEDDRGGALLLAVCRGKVSEGLDFADNSARAVVTIGI
PFPNVKDIQVDLKRKYNDQQLKSGRQVMAGNSWYETQAFRALNQALGRCIRHREDWGALI
IIDHRFSQQPKFQNALSKWIREQFQCFRYYNEAMDSLKTFMEGKMKKFSPPRCKSEPRGI
GPSNDCSMLPAGDTSSMSVDQTEPIELSNDSCEEMFASSPS
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcaaagctgagagctcggcgaagaaggagcctctctacatcgagtcccacgct
gtctacttccctcatacgccgtaccaatctcaaaagatggtcatcataaaggtcctacag
ggcttgagaaatggaaggaattgtctcatcgagtcacctacggggagtggaaagaccctt
gccctactctgctcgtgcttggcttggcaaaagaaaaagaaagaaattcatcaagcccag
gtggaaaagatgatgcaggcaatgcaagctcggcaccatgagttcgaagatactggctcg
tatgatccaagatgctcggctgtgccattgggtggtgcatcatgcaaaggctccagagtg
catgggtgcgcaaaacccgtcacaccattgaaggagcaacagccacaaccaaccaaaccc
tggagctacaagttggaaggaccccctcccgcaaacggtcctagctgcccacttgtggca
ttggagggtgcctcgtgtataggctccaaggtggatgacggaggcagccacaccacacct
tcaaaggtgccacagtcgccactagtcaaaccctggcagtacaaccttgaaggccctccc
ccgaaggatgctgcgtgctcactggtggcattggacggcgctgcttgtataggttctaaa
gtttatgacgagagagggctttgcgatacgcctttgaaagaggaacaggcggcagaagct
gctgaactcctcagttattatgttgcaacaccaagcccttcgggagtgacacgggcatgc
aaactctcgctaaaggcaaacagtccgtgtcgtgttgtgacgagtggtgcagtgcagtca
ccgaggcagcaggtggtatccgcccagcccgtcgtggcaagcccagccgtggcttcggcg
agtcaggcatccacggtggcgagccctactgtacctgccgcgttagccacccatctccct
gtggctcccggagatctgctcccggctaacgttaagcctggcaccgagtacatggtcgtt
cgcaacaccactggtcaaatgttggacctgaacaccttgctgtcgttgcctgagctgaaa
acaaacaaggatacgatcgttgcccaagcgagccaagtgacgcctgccaagcagcaagca
gtcggcaagccagtgaaggtgcaacctgtcaaaactccccttaaatcttctattccctca
cccatggatgatgacgatgacgacttcaagccaatgaagaaaatgcgccagtctgtaaat
actcatatacgtaatagccttgcaagccttccatcaccaaagcgggaggatgcttctgct
gttagcagtgccccgagcacttcaacagttctcgaacagctaatccaatcacagcagcag
ctccctccttcagaacaacccactccatccaaagggtgtcagggaatcgcggacaagccc
ttggagagggtacccacaattttctatggcacaagaacacacaaacagatagcgcaggtg
gtgagagagctgaagaagacggactattgccatgtcaagatgtgcatcttgtcaagtcgc
gagaggacctgcgtccacccggtcgtgtcgaagtcgacagccaagaacgagaggtgcaaa
gagctactagaggacatgacaagaggtcaagggggttgtggctactacatcaacatgaag
agggcacctcctgctccatcgatggagccctatgacttggaagacctcgtgaagattggg
aaaaggataagggtatgcccctactactggagtctagacctgatgccgggtgcggacata
atcttctgcccttacaactacctcatcgatccagtaattaggaaatgtttgtctatcgat
ttaaataatgctgtcgtggtacttgacgaagcgcacaatatcgaggacatcagtcgtgaa
gtgatgagcatctcagtcacgcaagaccagctgcgggacattatcgccgacttggaagaa
atgcagcgcattccatacatgcctgaagaacactatgccattgcgagtgtgatgtccaaa
cttagtctctggataacgcaacattcggatcacctggacgactacaggggcttcgaacag
tctgggaaggtctgggctggcactgaaatccttgcttttatgactgacgttggtctgagc
ccagagtgtttcaagaacttcaagactctcgttagtgctatcacaactgttgaaaaaccg
tcgccagaaatggacccggagcaggtcttgcctccaacagtcaatgcagcgacatctgcg
acgctgcaaaactttgtcatcatcttcgactttatgtacagggacgaccttaagtacctt
ggcgacttcagagctgctatggtgaaggctccatctaagaaaaagcaaacagaggcctct
aggtggttgtcaggtggtggtgttggtggatttaatgcggcctggacgcatagcctcaac
ttctggtgtctcaaccctgctgtcgccatgtcagacattaaggacaaggtacactccttg
atcgtggcatcggggacgctgacgcccatggagtcctttgagtctgagctcgacatgcct
ttcaagagccagttgcaggccaaccacgtcattccacgtgaaggggtctggattggaagc
attacatgtggacccaataatgtgaacctcaccgccaattttaaaactgcagagacattt
gagtttcaagatgagatagggtccatcctttgggacatctgcaaggctgtcccctatgga
gtgctatgcttcttcccatcgtatggcatgatgaacaaattgtcccagcgatggcagaac
actggaatgtggggcaagctggaaagactgaagcacattgccatggaaccccagaaggca
gactccgacagtttcgactgcaccatgaacgagtacttcaaccatgccttaggaaaatac
agcgatggttatgaggacgacaggggaggagcccttctgcttgccgtgtgtcggggcaaa
gtgagcgaaggcctggactttgccgacaacagtgcgagagccgtggtgacgattggcatt
ccatttcctaatgtaaaggatatccaggttgacctgaaacgcaagtacaatgaccagcag
ctcaagtctggcagacaagtgatggctggaaattcttggtacgagacgcaggcgttccgt
gctcttaatcaggccctgggaaggtgcattcgacacagggaagactggggtgccttgatt
ataatagaccaccgcttttcacaacaaccaaagtttcagaatgccctgtcaaagtggatt
cgggaacagttccagtgttttcgatactacaacgaagccatggattctctgaagacattc
atggaaggcaaaatgaagaagttttctcctccgcgctgcaaatcggaaccacgcgggata
ggcccttctaatgactgtagcatgttaccggcaggagacacgtcgagcatgtctgtggac
caaacagagccgattgaactctctaatgacagctgcgaagaaatgtttgcatcaagcccg
tcttga
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integrated database retrieval system
