Rhipicephalus microplus (southern cattle tick): 119159974
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Entry
119159974 CDS
T07403
Name
(RefSeq) Fanconi anemia group J protein homolog
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03440
Homologous recombination
rmp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119159974
03460 Fanconi anemia pathway
119159974
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rmp03400
]
119159974
Enzymes [BR:
rmp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
119159974
DNA repair and recombination proteins [BR:
rmp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
119159974
FA (Fanconi anemia) pathway
Downstream FA components
119159974
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
Myb_Cef
Motif
Other DBs
NCBI-GeneID:
119159974
NCBI-ProteinID:
XP_037268651
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All DBs
Position
1:complement(126675817..126738583)
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AA seq
1154 aa
AA seq
DB search
MDVKAESSVKKEPLYIESHAVYFPHTPYQSQKMVIIKVLQGLRNGRNCLIESPTGSGKTL
ALLCSCLAWQKKKKEIHQAQVEKMMQAMQARHHEFEDTGSYDPRCSAVPLGGASCKGSRV
HGCAKPVTPLKEQQPQPTKPWSYKLEGPPPANGPSCPLVALEGASCIGSKVDDGGSHTTP
SKVPQSPLVKRSKVYDERGLCDTPLKEEQAAEAAELLSHYVATPSPSGVTRACKLSLKAN
SPCRVVTSGAVQSPRQQVVSAQPVVASPAVASASQASTVASPTVPAALATHLPVAPGDLL
PANVKPGTEYMVVRNTTGQMLDLNTLLSLPELKTNKDTIVAQASQVTPAKQQAVGKPVKV
QPVKTPLKSSIPSPMDDDDDDFKPMKKMRQSVNTHIRNSLASLPSPKREDASAVSSAPST
STVLEQLIQSQQQLPPSEQPTPSKGCQGIADKPLERVPTIFYGTRTHKQIAQVVRELKKT
DYCHVKMCILSSRERTCVHPVVSKSTAKNERCKELLEDMTRGQGGCGYYINMKRAPPAPS
MEPYDLEDLVKIGKRIRVCPYYWSLDLMPGADIIFCPYNYLIDPVIRKCLSIDLNNAVVV
LDEAHNIEDISREVMSISVTQDQLRDIIADLEEMQRIPYMPEEHYAIASVMSKLSLWITQ
HSDHLDDYRGFEQSGKVWAGTEILAFMTDVGLSPECFKNFKTLVSAITTVEKPSPEMDPE
QVLPPTVNAATSATLQNFVIIFDFMYRDDLKYLGDFRAAMVKAPSKKKQTEASRWLSGGG
VGGFNAAWTHSLNFWCLNPAVAMSDIKDKVHSLIVASGTLTPMESFESELDMPFKSQLQA
NHVIPREGVWIGSITCGPNNVNLTANFKTAETFEFQDEIGSILWDICKAVPYGVLCFFPS
YGMMNKLSQRWQNTGMWGKLERLKHIAIEPQKADSDSFDCTMNEYFNHALGKYSDGYEDD
RGGALLLAVCRGKVSEGLDFADNSARAVVTIGIPFPNVKDIQVDLKRKYNDQQLKSGRQV
MAGNSWYETQAFRALNQALGRCIRHREDWGALIIIDHRFSQQPKFQNALSKWIREQFQCF
RYYNEAMDSLKTFMEAKMKKFSPPRCKSEPRGIDPSNDCSILPAGDTSSMSVNQTEPIEL
SNDSCEEMFASSPS
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcaaagctgagagctcggtgaagaaggagcctctctacatcgagtcccatgct
gtctacttccctcatacgccgtaccaatctcaaaagatggtcatcataaaggtcctacag
ggcttgagaaatggaaggaattgtctcatcgagtcacctacggggagtggaaagaccctt
gccctactctgctcgtgcttggcttggcaaaagaaaaagaaagaaattcatcaagcccag
gtggaaaagatgatgcaggcaatgcaagctcggcaccatgagttcgaagatactggctcg
tatgatccaagatgctcggctgtgccattgggcggtgcatcatgcaaaggctccagagtg
catgggtgcgcaaaaccagtcacaccattgaaggagcaacagccacaaccaaccaaaccc
tggagctacaagttggaaggaccccctcccgcaaacggtcctagctgcccacttgtggca
ttggagggtgcctcgtgtataggctccaaggtggatgacggaggcagccacaccacacct
tcaaaggtgccacagtcgccactagtcaaacgttctaaagtttatgacgagagagggctt
tgcgatacgcctttgaaagaggaacaggcggcagaagctgctgaactcctcagtcattat
gttgcaacaccaagcccttcgggagtgacacgggcatgcaaactctcgctaaaggcaaac
agtccgtgtcgtgttgtgacgagtggtgcagtgcagtcaccgaggcagcaggtggtatcc
gcccagcccgtcgtggcaagcccagccgtggcttcggcgagtcaggcatccacggtggcg
agccctactgtacctgccgcgttagccacccatctccctgtggctcccggagatctgctc
ccggctaacgttaagcctggcaccgagtacatggtcgttcgcaacaccaccggtcaaatg
ttggacctgaacaccttgctgtcgttgcctgagctgaaaacaaacaaggatacgatcgtt
gcccaagcgagccaagtgacgcctgccaagcagcaagcagtcggcaagccagtgaaggtg
caacctgtcaaaactccccttaaatcttctattccctcacccatggatgacgacgatgac
gacttcaagccaatgaagaaaatgcgccagtctgtaaatactcatatacgtaatagcctt
gcaagccttccatcaccaaagcgggaggatgcttctgctgttagcagtgccccgagcact
tcaacagttctcgaacagctaatccaatcacagcagcagctccctccttcagaacaaccc
actccatccaaagggtgtcagggaatcgcggacaagcccttggagagggtacccacaatt
ttctatggcacaagaacacacaaacagatagcgcaggtggtgagagagctgaagaagacg
gactattgccatgtcaagatgtgcatcttgtcaagtcgcgagaggacctgcgtccacccg
gtcgtgtcaaagtcgacagccaagaacgagaggtgcaaagagctactagaggacatgaca
agaggtcaagggggttgtggctactacatcaacatgaagagggcacctcctgctccatcg
atggagccctatgacttggaagacctcgtgaagattgggaaaaggataagggtatgcccc
tactactggagtctagacctgatgccgggtgcggacataatcttctgcccttacaactac
ctcatcgatccagtaattaggaaatgtttgtctatcgatttaaataatgctgtcgtggta
cttgacgaagcgcacaatatcgaggacatcagtcgtgaagtgatgagcatctcagtcacg
caagaccagctgcgggacattatcgccgacttggaagaaatgcagcgcattccatacatg
cctgaagaacactatgccattgcgagtgtgatgtccaaacttagtctctggataacgcaa
cattcggatcacctggacgactacaggggcttcgaacagtctgggaaggtctgggctggc
actgaaatccttgcttttatgactgacgttggtctgagcccagagtgtttcaagaacttc
aagactctcgttagtgctatcacaactgttgaaaaaccgtcgccagaaatggacccggag
caggtcttgcctccaacagtcaatgcagcgacatctgcaacgttgcaaaactttgtcatc
atcttcgactttatgtacagggacgaccttaagtaccttggcgacttcagagctgctatg
gtgaaggctccatctaagaaaaagcaaacagaggcctctaggtggttgtcaggtggtggt
gttggtggatttaatgcggcctggacgcatagcctcaacttctggtgtctcaaccctgct
gtcgccatgtcagacattaaggacaaggtacactccttgatcgtggcatcggggacgctg
acgcccatggagtcctttgagtctgagctcgacatgcctttcaagagccagttgcaggcc
aaccacgtcattccacgtgaaggggtctggattggaagcattacatgtggacccaataat
gtgaacctcaccgccaattttaaaactgccgagacatttgagtttcaagatgagataggg
tccatcctttgggacatctgcaaggctgtcccctatggagtgctatgcttcttcccatcg
tatggcatgatgaacaaattgtcccagcgatggcagaacactggaatgtggggcaagctg
gaaagactgaagcacattgccattgaaccccagaaggcagactccgacagtttcgactgc
accatgaacgagtacttcaaccatgccttaggaaaatacagcgatggttatgaggacgac
aggggaggagcccttctgcttgccgtgtgtcggggcaaagtgagcgaaggcctggacttt
gccgacaacagtgcgagagccgtggtgacgattggcattccatttcctaatgtaaaggat
atacaggttgacctgaaacgcaagtacaatgaccagcagctcaagtctggcagacaagtg
atggctggaaattcttggtacgagacgcaggcgttccgtgctcttaatcaggccctggga
aggtgcattcgacacagggaagactggggtgccttgattataatagaccaccgcttttca
caacaaccaaagtttcagaatgccctgtcaaagtggattcgggaacagttccagtgtttt
cgatactacaacgaagccatggattctctgaagacattcatggaagccaaaatgaagaag
ttttctcctccgcgctgcaaatcggaaccacgcgggatagacccttctaatgactgtagc
atcttaccggcaggagacacgtcgagcatgtctgtgaaccaaacagagccgatcgaactc
tctaatgacagctgcgaagaaatgtttgcatcaagcccgtcttga
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