Rhipicephalus microplus (southern cattle tick): 119180997
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Entry
119180997 CDS
T07403
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1-like
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
119180997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rmp03021
]
119180997
Enzymes [BR:
rmp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
119180997
Transcription machinery [BR:
rmp03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
119180997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
119180997
NCBI-ProteinID:
XP_037288045
LinkDB
All DBs
Position
11:complement(13437256..13997018)
Genome browser
AA seq
1758 aa
AA seq
DB search
MDVEKIPHRFVDGISFSVFSTEELLRQGVLEVTCAETFDIVGHPTKGGLHDALLGPSDRD
EVCATCGLGFTHCPGHIGYIRLPLLVFNPVFLRTLYQLLRGSCFSCHRLLSPPVACQVTL
AQLQVLQYGAVGAVQELEDLANETLAGDDDDDKGRLAHGGAIRATVQRRIKQCVASVVDG
VGDMEEARRAAGVKNVVECRQRIVKTFIREHLMGAPRKCPHCGELRRAMTIQNNSRFVYT
SKIRPVGKAPALSVTFRRTHDGFEEEDEVVAVEEERQAQQKKAEEDAVTGALSYLTPVEA
RAHLRELWTKERSLLQNLFGILALASSSHESPVDMFFLEALVVPPTRFRPMNFMNGRKYE
NAQTVSLSRVLQCCDSLRAVLKLLARRGTNKSEPPEDQMEIERLEQLVSKVMGKDLDAKM
HFAWNALQVAVNVVVDSELDRLNTNKGTPGIKQILEKKEGLFRKHMMGKRVNYAARSVIS
PDPYIDVEEIGVPMVFATKLSYPEPVTERNIAELRRAVINGPDVYPGALLVEREDGGVIR
LDPTNRTRREAVAKQLLTPTEAPQHIFARSKIVHRHLRQGDMLLLNRQPTLHKPSIMAHR
ARVLPGERTLRLHYANCKCYNADFDGDEMNAHLPQSPLAQAEASEVASVNRQYLVPKDGT
PLSGLIQDHVIGGSLLTMQGRFFTREDYNQLVFGALTFVKTGIKLLPPAIQKPETLWTGK
QVLSTVLLNCIPHGKPPPTVEGKAKIPAKAWLKGGETEAIMNEGNVVIRDGELLCGILDK
ANYGPTQFGLVHVCYELYGGAVSSLVLSAFARLFTHYLQIFSGFTLGIEDILVTDKADRK
RKRIMKKAKMQGEGVAVKALGLENEDELDAVLLEDRLRAAHVARNDRQMKQLDSSMKSVT
DDVNNRINRACIPDGLLKKFPSNNLQLMVQSGAKGGMVNCMQISCLLGQIELEGRRVPLM
LSGRTLPSFLHYDTSPRAGGFVDGRFLTGIQPQEYFFHCMAGREGLVDTAVKTSRSGYLQ
RCLIKHLEGLMVCYDQTVRDSDGSVIQFQYGEDGLDVLKMQMLKPSQFPVLIKNSRAVIN
MNDIVQCERATDHDELHRLKRAVRKWRKKTDKDVESESRRQSAFTLFSRTKGLLVRDEHL
KFFHQATSETARQAILEAYFNLDERTHHKLNKFIVKRADPVCSKLRSDVHLGAVSERLDT
LIEDYIERNPHGLLLADKSQKGKDMEKNTVTADEFRKLVYMRNMKAICDPGEPVGLLAAQ
SIGEPSTQMTLNTFHFAGRGEMNVTLGIPRMREILMVASANIATPTMDLHLLQQPNIEQC
AEELRVKITSVNLSQVLEDVSVKEMLHVKGRLERYRRYQVHFTFLPWRAYRKKLQATPAR
ILRYMETTFLRRLIDAIKRKMEQVSSERMTRTTKARERRSEEAGSAEDTGLTPQCPDVDE
GGESSDEGEGDGDTVARQAAARHAQEQEYEEAEEEERVAAMSDDEMVDGEAAPPAESSLL
SAEEGTISNDIFVSLQETIRDEKAEKLKQARIFSVVKYNTWVLEYDYDDVKEEWCTFTFQ
LELKGSKFDFASMVEEESAKAIFHSVPNITRAFLVKDMKDKSGCGKMLQTEGVNFVEMFR
YGEIIDLKRIYSNDVHAIANTFGIEAARTAIAREVANVFAVYGIEVDPRHLLLVADYMTF
DGSYRACNRIAMESNASPLQQMTFETTMNFLKSATLAGTKDQLNSPSARLVVGRVVPLGT
GCMQLRQPQTANFKLHSR
NT seq
5277 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcgagaaaatccctcaccgatttgtggacggcatcagcttcagcgtgttcagc
accgaggagctgctgcggcaaggcgtgctcgaagtgacctgcgctgaaacgttcgacatc
gtcgggcacccgacgaaaggcggcctccacgatgccctgcttgggcccagtgaccgtgac
gaagtgtgtgccacctgtggcctgggcttcacccactgccctggtcacattggttacatc
aggttgcccctgctggtgttcaacccggtcttcctcaggactctgtatcagttgctccga
gggagctgcttctcctgccatcgtttgctgtcgccaccagttgcttgccaggtgacgctg
gcacaactgcaggtgctccagtacggcgcagttggtgcagtgcaagaactggaggacctt
gccaacgagaccctggccggcgacgacgacgacgacaaaggtcggctcgctcatggtgga
gccattagggccacagttcagcgacgcatcaagcagtgtgtggcatcggtcgttgatggt
gttggcgacatggaagaggctcgtcgggcagcaggtgtgaagaatgttgtggagtgtagg
caacgcatcgtgaagacgttcatccgtgagcacctcatgggagcgccgcgcaaatgcccg
cattgcggtgaactgcgtcgggccatgaccatccagaacaacagccgcttcgtctacacc
agcaaaattcgaccggttgggaaagcacctgccctgtctgtgacgtttaggcgcacgcac
gatggctttgaagaagaggacgaagttgtggccgtagaagaagagcgccaggcccagcag
aagaaggctgaggaggatgcagtgactggcgccctgtcgtacttgactcccgtggaggct
cgtgcccacctgcgggagctgtggaccaaagagcggtcgctgctgcagaacctgtttggc
atcctggccctcgcatctagctcacacgagagccctgtcgacatgtttttccttgaggcc
ctggttgtccctccaacacggtttcgcccaatgaacttcatgaatggccgcaagtacgaa
aatgcgcagacggtgagtctgtcgcgggtgctgcagtgctgcgacagcctgcgggccgtg
ctcaagctgcttgcacgcagaggcaccaataagtcagagccgcccgaagatcagatggag
atagaacggctcgagcaactagtgagcaaagtgatgggcaaggacttggatgccaagatg
cactttgcatggaatgcactgcaagtggcggtcaacgtcgtcgtggacagtgagctggat
cggctcaacaccaacaagggcacaccgggcattaagcagattctggaaaaaaaagaagga
ctgttccgcaagcacatgatgggtaagcgtgtcaactatgcggcacgctcggtgatctcg
ccagatccgtacatcgatgtcgaggagattggtgtgcccatggtgtttgccaccaagctg
tcctacccggagcccgtcactgagcgcaacatagcagagttgagaagagcagtcatcaat
ggaccggatgtttaccctggagctctgctggtggaacgagaggatggtggggtgatccga
ttggacccgaccaatcgcacgcggcgggaagcggtggccaagcagctgcttactccgacc
gaggccccccaacacatatttgcacgctccaagattgtgcaccggcatttgcggcaaggc
gacatgctgctactcaaccggcagccaactttgcacaagcccagcatcatggctcacagg
gcacgtgtgctgccaggggagcgcaccctacggctgcactacgcaaactgcaagtgctac
aatgccgactttgacggcgacgagatgaatgcgcacctgccccagagtcccctggcacag
gccgaggcctccgaggtagccagcgtcaaccggcagtacctggtgcccaaggacggcaca
ccgctcagcggcctcatccaagaccacgtcattgggggatccctgctcaccatgcaggga
cgcttcttcaccagagaggactacaaccagctcgtgttcggagccctgacttttgtcaag
actggcatcaagctcctaccgccggccatccaaaaaccagagacgctgtggacaggcaag
caggtgctgtcaactgtgctactcaactgcataccgcatggcaagccccctcctacagtt
gaaggcaaagccaaaattccagccaaggcatggctaaagggtggcgaaacagaggccatc
atgaatgaaggcaatgtggtcattcgagatggcgagcttctctgcggcatcctcgacaag
gccaactatggtccgacccagtttggtctggttcatgtctgctacgagctgtacggaggt
gcggtatccagcttggtgctgagtgcctttgcgaggcttttcacgcactacctacagatt
ttttctggcttcacgcttggcattgaagacatcctggtcaccgacaaagccgacaggaaa
cgcaaacgcatcatgaagaaggccaagatgcaaggcgagggggtagctgtcaaggccctt
ggtcttgagaatgaggacgagctggatgctgtcttgctggaggacaggctgagggcagcg
cacgtggcgcgtaacgacagacagatgaagcagctcgattccagcatgaagtcggtcacc
gacgatgtcaacaatcggatcaacagggcctgcattccagatggcctgctgaaaaagttt
cccagtaacaacctacagctgatggtgcagtctggggcaaagggaggaatggtgaactgc
atgcagatctcgtgcttgctgggccagattgaactggaggggcgccgggtgccactcatg
ctcagtggacgcacgttgccatcttttctacactacgacacatcaccacgcgcaggcggc
tttgtggacggccgttttctgacgggaatccagccgcaggaatatttctttcactgcatg
gctggacgtgagggtttggtagatacggctgtgaagaccagccgcagtggctacctgcaa
cgttgcctcatcaagcacctggaggggcttatggtgtgctatgatcagacggtcagggac
agcgatggaagtgtcatacagttccagtatggagaagacggcctggatgtgctgaagatg
cagatgctaaagccgagccagtttcccgtgctcatcaaaaacagccgagcagtcataaac
atgaacgacattgtgcagtgcgaacgggccactgaccacgacgaactgcacaggttaaaa
agagcggtgcgcaagtggagaaagaaaacggacaaagatgttgaaagtgaatcacgcagg
cagagtgccttcacccttttctctagaacaaaagggttgctagtgcgtgatgagcacttg
aagttcttccaccaagcaacttctgagacagctcgccaggctatattggaggcctacttc
aacctcgatgaacggacacatcacaaactcaacaaattcattgtgaagcgtgcagaccca
gtctgttcgaagctgcggagtgacgtccatctcggagctgtgtctgaacggctggacaca
ttaattgaagactacattgagagaaatcctcatggcctgctcttggctgataaatcgcaa
aaagggaaagacatggaaaagaacactgtcaccgcggatgagttccggaaactggtttac
atgcgtaacatgaaagccatctgtgacccgggggaaccagtgggtctgctagctgctcag
agcattggtgagccgtcgacacagatgacgctgaacacatttcactttgcgggtcgaggt
gagatgaacgtgactctgggaatcccgcggatgagggagatcctcatggtagccagtgct
aacattgccacgcctaccatggacctacatttgctacagcagccaaacattgagcagtgc
gctgaggagcttcgggtcaaaatcacctccgtcaacctctcacaggtgctcgaggatgtg
tctgtcaaagagatgctgcacgtcaagggacggttggaacggtaccgcaggtatcaggtc
cactttacctttttgccttggcgagcgtaccgcaagaagttgcaggcgacgccagctcgc
attctacgctacatggagaccactttcctccggcggctcatcgatgccatcaagcgcaaa
atggagcaagtctcctccgagagaatgacacgcacgacgaaagcacgagaacgtcggagt
gaggaggctggctcggctgaggacactggcctgacgccacagtgtccagatgtcgacgag
ggaggtgagagttcggacgagggtgaaggggacggcgacacagttgcccgacaggctgct
gcccgccacgcccaggagcaggagtacgaggaagctgaagaggaagagcgtgtcgccgcc
atgtccgacgacgagatggttgatggtgaggccgcaccacctgctgagtcttctctgctg
tcagccgaagaaggcaccatttccaatgacatctttgtctcgctccaagagactattcgg
gatgagaaggctgagaagctgaagcaagccaggattttttcggtggtgaagtacaacacg
tgggttctggagtacgactacgatgatgtcaaggaagagtggtgtacatttacgtttcag
cttgaactgaaaggaagcaaattcgactttgcctcaatggtggaggaagagtcagcgaag
gccatctttcattccgtgcccaacatcacacgggccttccttgtcaaggacatgaaggac
aagtccggctgcgggaagatgctccagacggaaggtgtcaactttgtggagatgttccga
tatggtgaaataattgatctgaagcgcatctacagtaacgacgttcatgccattgccaac
acgtttggaattgaagcggcgagaacagcgattgctcgggaggtggccaacgtgtttgct
gtctacggcatcgaggtggatccgaggcacctgctgctagtggctgactacatgacattt
gatggtagctaccgtgcatgcaaccgcatcgccatggagagcaatgcctcacccttgcag
cagatgaccttcgagacaaccatgaactttctcaagtcggctaccctggctggtacaaaa
gaccaactcaactctccatccgctcgtcttgtggtgggccgggtggtgcctctgggcaca
ggttgcatgcagctgcggcagccccagactgccaacttcaagttgcactctcgttag
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integrated database retrieval system
