Rhodothermus marinus DSM 4252: Rmar_0336
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Entry
Rmar_0336 CDS
T01119
Name
(GenBank) thiamine pyrophosphate protein domain protein TPP-binding protein
KO
K00175
2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:
1.2.7.3
1.2.7.11
]
Organism
rmr
Rhodothermus marinus DSM 4252
Pathway
rmr00010
Glycolysis / Gluconeogenesis
rmr00020
Citrate cycle (TCA cycle)
rmr00620
Pyruvate metabolism
rmr00650
Butanoate metabolism
rmr01100
Metabolic pathways
rmr01110
Biosynthesis of secondary metabolites
rmr01120
Microbial metabolism in diverse environments
rmr01200
Carbon metabolism
rmr01210
2-Oxocarboxylic acid metabolism
Module
rmr_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rmr_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rmr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
Rmar_0336
00020 Citrate cycle (TCA cycle)
Rmar_0336
00620 Pyruvate metabolism
Rmar_0336
00650 Butanoate metabolism
Rmar_0336
Enzymes [BR:
rmr01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.3 2-oxoglutarate synthase
Rmar_0336
1.2.7.11 2-oxoacid oxidoreductase (ferredoxin)
Rmar_0336
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TPP_enzyme_C
PFO_beta_C
DPPIV_N
Imm-NTF2-2
Motif
Other DBs
NCBI-ProteinID:
ACY47241
UniProt:
D0ME17
LinkDB
All DBs
Position
complement(370681..371739)
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AA seq
352 aa
AA seq
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MPPGAKPAGDGKPRLTRKDFASDQDVRWCPGCGDYAILATVQRLLPELDVPRENIVFISG
IGCSSRFPYYMNTYGMHSIHGRAPAIATGLKASRPELDVWIITGDGDALSIGGNHLIHIL
RRNLNVQILLFNNQIYGLTKGQYSPTSEEGKITKSSPYGSIDHPFNPVALALGADATFVA
RSMDRDTKHLQDMLRRAHDHRGAAFVEIYQNCNIFNDGAFFQFTERDTKPHRALFLEHGK
PLVFDEGRKGIRLDGFRPEVIDLTDGRWSIDDCLVYDETNRELAHIMARIFFRPDLPQPF
GVFYREERPTYEDLLHRQIAEVTARKGKGDLQALLRSGDTWVIEPELAEASE
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgggcgcgaaaccggccggcgacggcaagccgcgcctgacgcgtaaggacttc
gcctcggatcaggacgtgcgctggtgcccgggctgcggcgactatgccatcctggccacc
gtccagcgcctgctgcccgagctggacgtaccccgcgagaacatcgtgttcatcagcggg
atcggctgctccagccgcttcccctactacatgaacacctacggcatgcactccatccac
ggccgggcgccggccatcgccacggggctgaaggccagtcggccggagctggacgtgtgg
atcatcacgggtgacggcgacgccctgtcgatcggcggcaaccacctgatccacatcctg
cgccgcaacctgaacgtgcagattctgctgttcaacaaccagatctacggcctcacgaag
ggccagtacagcccgacctcggaagaaggcaagatcacaaaaagttcgccgtacggctcg
atcgaccaccccttcaacccggtagcgctggcactcggcgccgacgctacgttcgtggcc
cgctccatggaccgcgacacgaagcacctgcaggacatgctccgccgggcgcacgaccac
cggggcgccgccttcgtcgagatctaccagaactgcaacatcttcaatgacggcgccttc
ttccagtttaccgagcgcgacacgaagccgcaccgagcgcttttcctggagcacggcaag
ccgctcgtgttcgacgaaggccgcaaggggatccggctcgacggcttccggcccgaggtg
atcgacctgaccgacggccggtggtccatcgacgactgcctcgtctacgacgagacgaac
cgcgagctggcccacatcatggcacggatctttttccggcccgacctgccgcaacccttc
ggcgtcttctaccgggaggagcgtcccacctacgaggacctgctgcaccgtcagatcgcc
gaggtgacggcgcgcaagggcaagggtgacctgcaggccctgctccggagcggcgatacc
tgggtcatcgaacccgaactggccgaggcttccgaataa
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