Rhodothermus marinus DSM 4252: Rmar_1469
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Entry
Rmar_1469 CDS
T01119
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
rmr
Rhodothermus marinus DSM 4252
Pathway
rmr00071
Fatty acid degradation
rmr00280
Valine, leucine and isoleucine degradation
rmr00310
Lysine degradation
rmr00362
Benzoate degradation
rmr00380
Tryptophan metabolism
rmr00410
beta-Alanine metabolism
rmr00640
Propanoate metabolism
rmr00650
Butanoate metabolism
rmr00907
Pinene, camphor and geraniol degradation
rmr00930
Caprolactam degradation
rmr01100
Metabolic pathways
rmr01110
Biosynthesis of secondary metabolites
rmr01120
Microbial metabolism in diverse environments
rmr01200
Carbon metabolism
rmr01212
Fatty acid metabolism
Module
rmr_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
rmr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Rmar_1469
00650 Butanoate metabolism
Rmar_1469
09103 Lipid metabolism
00071 Fatty acid degradation
Rmar_1469
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Rmar_1469
00310 Lysine degradation
Rmar_1469
00380 Tryptophan metabolism
Rmar_1469
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Rmar_1469
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Rmar_1469
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Rmar_1469
00930 Caprolactam degradation
Rmar_1469
Enzymes [BR:
rmr01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Rmar_1469
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
Rmar_1469
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
Rmar_1469
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
DUF1707
2-Hacid_dh_C
F420_oxidored
DUF1731
Motif
Other DBs
NCBI-ProteinID:
ACY48356
UniProt:
D0MIP8
LinkDB
All DBs
Position
complement(1711814..1713976)
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AA seq
720 aa
AA seq
DB search
MTTMTEQTQPAIRYERDADGIVTLTMDMPGRSANVINEVLAEALAAALDRLEQEKDAISG
VILTSAKSTFLAGADLEGLLALRDPAEAFRRAEQFKALLRRLETLGRPVVAAINGTALGG
GMELALACHRRIVRDDPSIRLGFPEVTLGLIPGGGGITRLVRLLGLEAAHPYLIEGRQVS
PREALAAGLVHELAESNEALLEKARAWIRSRPDPTQPWDRPDYRMPGGDPRHPRMMQMLA
VAPAILRKQTWGNYPAPEAILSAAVEGALVTFDTASRIESRYFARVATGQVAKNMIQTFW
FQLNEINRGRSRPAGIPPTDTKKVGVLGAGLMGHGIAYVTALAGMEVVLKDLTLEKAEAG
KARIAKLLDERVAKGRLSPEEKQAVLDRIRTTDRVEDLAGCDLVIEAVFENRDVKAQVIR
ETEAVLPEDAVFGSNTSTLPITSLAAYSRRPDRFVGIHFFSPVHRMRLVELIRGRQTSDE
ALAKAFDYVRKIGKTPIVVNDSRGFYTSRVFGTYLNEGLALLAEGQHPRAIEVAGRQAGM
PIGPLAVADEVSLQLMEHIREQTEKDLAAEGKTLPPHPAYRVLDVMVREHGRLGKAHGAG
FYEYPKDGPKYLWPELRRLFPPQGEPLPQQEMIDRLLFVQALETVRCLDEGVLTSVADAN
IGSVFGWGFAPFHGGTLQFINAYGLERFVARAEALAERYGERFMPPERLRDMARRGEVFA
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccatgaccgaacagacgcaaccggccattcgctacgagcgcgacgccgacggg
atcgtcacgctgacgatggacatgccggggcgctcggcgaacgtgatcaacgaagtgctg
gccgaagcgctggcggccgcgctcgatcggctggaacaggaaaaagacgccatcagcggc
gtgatcctgacttcggccaagtccacgtttctggccggggccgatctggaagggctgctg
gcgttgcgcgatccggccgaggcgttccgccgcgccgagcagttcaaggcgctgctccgg
cgcctggagacgctggggcgtcccgtggtggccgccatcaacgggacggcgctcggcggc
ggcatggagctggcgctggcctgccaccggcgcatcgtgcgcgacgatccatccatccga
ctgggcttcccggaggtgacgctcggcctgattcccgggggcggcggcatcacccggctg
gtgcggctgctggggctggaggcggcccatccttacctgatcgaaggccgccaggtatcg
cctcgcgaagcgcttgcggcgggtctggtgcatgagctggccgaaagcaatgaagcgctg
ctggaaaaggcccgcgcctggatccgttcgcgaccggatcccacgcaaccctgggatcgg
ccggactaccggatgccgggcggcgatccccgtcatccgcgcatgatgcagatgctggcc
gtggcgccggccatactccgcaagcagacctggggcaactacccggcacccgaggccatc
ctgagcgccgccgtcgaaggcgcgctcgtgacgttcgacacggccagccgcatcgagtcg
cgctacttcgcccgcgtggccaccggccaggtggcgaagaatatgatccagacgttctgg
tttcagctcaacgagatcaacagggggcgcagccgtccggccggaattccgcccaccgat
acgaaaaaagtcggcgtgctcggggccggtctgatggggcacggcatcgcctacgtgacg
gccctggcgggcatggaggtggtgctgaaggacctgacgctggaaaaggccgaggccggc
aaggcccgcatcgcgaagctgctcgacgaacgcgtggcgaagggacgtctctcgcccgaa
gagaagcaggccgtgctcgaccgcattcgcacgaccgaccgcgtcgaagacctggccggg
tgcgatctggtgatcgaggcggtcttcgaaaaccgagacgtcaaggcgcaggtcatccgc
gaaaccgaagcggtactgcccgaagacgccgttttcggctcgaatacctcgacgctcccc
atcaccagcctggccgcctattcccggcgcccggaccggttcgtgggcattcacttcttc
tcgccggtgcatcgcatgcggcttgtcgagttgatccgcgggcgccagacctcggacgag
gcgctggcgaaggcgttcgactacgtacgcaaaatcggcaagacgccgatcgtggtgaac
gacagccgcggcttctacacgtcgcgcgtcttcggcacctacctgaacgaagggctggcg
ctgctggccgaagggcagcatccacgcgccatcgaggtggcgggccgccaggcgggtatg
cccatcggaccgctggccgtggccgacgaggtgagcctgcagctcatggagcacatccgc
gagcagactgagaaagacctggccgccgagggcaagacgctcccgccgcatccagcctat
cgggtgctcgacgtgatggtgcgtgagcacggccggctcggtaaggcgcacggtgcgggc
ttctacgaatatccgaaagacggccccaaatacctgtggccggagttgcgacggctcttc
ccgccgcagggtgagccgctgccgcagcaggagatgatcgaccgcctgttgttcgtgcag
gcgctggagaccgtacgctgtctggacgaaggcgtgctcacttcggtggccgacgccaac
atcgggagcgtattcggctggggttttgcgccgtttcacgggggtacgctccagttcatc
aacgcctacggcctggagcgctttgtggcacgggccgaagcactggccgagcgctatggc
gaacgattcatgccgccggagcgtcttcgcgacatggcccgccgcggtgaagtgtttgcc
tga
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