Rhodothermus marinus DSM 4252: Rmar_1941
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Entry
Rmar_1941 CDS
T01119
Name
(GenBank) glycoside hydrolase family 2 sugar binding protein
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
rmr
Rhodothermus marinus DSM 4252
Pathway
rmr00052
Galactose metabolism
rmr00511
Other glycan degradation
rmr00600
Sphingolipid metabolism
rmr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rmr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
Rmar_1941
09103 Lipid metabolism
00600 Sphingolipid metabolism
Rmar_1941
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
Rmar_1941
Enzymes [BR:
rmr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
Rmar_1941
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro2_C5
Glyco_hydro_2_C
DUF4982
Glyco_hydro_2
Glyco_hydro_2_N
BetaGal_gal-bd
BetaGal_ABD2
Big_1
Invasin_D3
Motif
Other DBs
NCBI-ProteinID:
ACY48824
UniProt:
D0MKB2
LinkDB
All DBs
Position
complement(2266979..2269690)
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AA seq
903 aa
AA seq
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MRISGSRYRMFLGGGLLLLLTILPLQAQPAQELLRERVLLNEDWRFFKYPSRAEADGLVY
DVWPMYRMDADTAGAPKEAIVLKPWILPTGNPFIKDPARRYRRPPGHPGRDFPFVQPDFD
DSGWERVDLPHDWAIRGPFVEQPHPEVDGGMGWLPSPGVAWYRKKIFIPAADSERAIYLD
VEGAMAHAVVWLNGYLVGGWPYGYASWRVDLTPYVRWGAENQLAIRLEVLPRSSRWYPGG
GLYRNVWLVKTHPVHVAQWGTFVRTPYVSTDSATVVLDVTIENRWARAVSVRVTTEIFEL
GEEDRPRGDAVAAFPPRQVRVPAQGQATASGMATVRNPKLWGPPPTQTPHRYVAVTTLWL
DGRPVDRYETRFGIRSLRFDPERGLLVNGERIEIKGVNQHHDLGPLGAAFNRRAAERQLE
LLREMGANAIRTAHNPPAPELLELTDRMGFLVLDEIFDVWEMRKTPLDFHLIFPDWHEQD
LRAFIRRDRNHPSVILWSFGNEVGEQGSGREGAELARRLARIIKEEDPTRPVTASMNFAR
PGTPMPEVVDVICLNYQGEGIRDMPAYTGLQGITTPPLYSAFRIHFPTKMIISCENAAAV
SSRGAYLFPVTDALSAPVREGQGGDPVTRQVSGYELYTADFGSSVDKVFFVQELHPFVAG
GFVWSGWDYLGEPTPYYSSRSSYFGIIDLAGFKKDRFYLYQARWRPELPMVHILPHWNWP
DRVGEITPVHVFTSGDEVELFLNGRSLGRKKKGPYQYRLRWDDVRYEPGELRAVAYKNGR
KWAEAVVQTTGQPTALAAEADRVRIQADGYDLAFITVRVVDAEGRTVPTADNPVRFTVEG
PGELVATANGDPTSFIPFSSDERPAFNGLVLAIVRARRGMPGTITVTASAPGLRPARIVI
ESQ
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatctccggttctcgctatcggatgtttttaggaggcgggctgctcctgctgctg
acgatcctgccattgcaggcacaacccgcgcaggagctgctgcgcgagcgggttttgctt
aatgaagactggcgcttcttcaagtacccctcccgggcggaagccgacggactggtctac
gacgtgtggccgatgtaccggatggatgcagacaccgccggagcaccgaaggaggcgatc
gtccttaagccctggattctgcccacgggcaatcctttcatcaaagatccggcccgacgt
tacaggcgacccccgggacatcccgggcgtgacttcccgttcgtgcagccggacttcgac
gatagcggctgggaacgagtagacctgccgcacgactgggccattcggggccccttcgtg
gaacaaccacatcccgaggtggacggcggcatgggctggctgcccagcccgggcgtggcc
tggtaccggaagaaaatcttcatcccggccgccgattcggagcgggcgatctacctggac
gtcgagggcgcgatggctcacgccgtcgtctggctgaacggctacctggtgggtggctgg
ccctacggctacgcttcctggcgcgtggatctgaccccatacgtccgctggggcgcggaa
aaccagcttgccatccgacttgaggtgcttccacgctcgtcgcgctggtatcccggcggt
ggattgtaccgcaacgtctggctggtcaagacgcatccggtgcacgtggcgcaatggggc
acgttcgtgcgcacaccctacgtctcgaccgactcggccaccgttgtgctggatgtgacc
atcgaaaaccgatgggcccgggccgtctcggtgcgcgttacgacagagatcttcgagctg
ggcgaagaggaccggccacggggcgatgccgtcgccgcgttcccgccccggcaggtgcgg
gtaccggcgcaggggcaggctacggcgtccggcatggcgacggttcgcaacccgaagctg
tggggacctccgcccacgcagacgcctcaccgctacgtggccgtcaccacgctgtggctc
gacggccgcccggtcgatcgctacgaaacccgcttcggcatccgctcgctgcggttcgat
ccggagcgcgggctgctggtcaacggcgagcgcatcgaaatcaaaggcgttaaccagcat
cacgacctggggccgctgggcgcggccttcaaccgaagggcggccgagcgccagctcgaa
ctgctgcgtgagatgggcgccaacgccattcgtaccgcccataacccgccagctcccgag
ctgctggagcttaccgaccgcatgggcttcctcgtgctcgacgagatcttcgacgtctgg
gagatgcgaaaaaccccgctcgacttccacctgatctttccggactggcacgagcaggac
ctgcgcgcctttatccgccgcgaccgcaaccacccgtcggtcattctctggagcttcggc
aatgaagtgggcgagcagggaagcggccgcgagggggccgagctggcccggcgactggcc
cgcatcatcaaagaggaggatcccacgcggccggtgacggcgtctatgaatttcgcccgg
ccggggacgccgatgcccgaggtggtggacgtcatctgcctgaactatcagggtgaaggg
atccgggacatgccggcctatactggtttgcaggggatcaccacaccacccctttacagc
gcatttcgcatacatttccctacaaaaatgattatcagttgtgaaaatgcggccgctgta
agttcgcggggcgcctatctctttccagttacagatgccctgagtgcacctgttcgtgaa
ggccaggggggtgatccggttaccaggcaggtaagcggctatgagctatatacggcggat
tttggctcttcggtggacaaggtgtttttcgtgcaggaactccatccttttgtggccggc
ggtttcgtctggagcggctgggactatctgggcgagcccacgccctactacagttcgcgc
agctcttatttcgggatcatcgatctggccggtttcaaaaaggatcggttttacctgtat
caggcccgctggcgtcccgagctaccgatggtgcatatcctgccccactggaactggccg
gatcgcgtgggggagatcacgcccgtgcatgtgttcacctcgggcgacgaggtggaactg
ttcctcaatggccgatcgctcggccgcaagaaaaaagggccctaccagtaccgcctgcgc
tgggacgacgtgcgctacgagcccggcgaactacgcgccgtggcctataaaaacggccgg
aagtgggccgaagccgtcgtgcagaccaccggccagccgaccgcgctggccgccgaggcg
gaccgtgtccggatccaggccgacggctacgacctggcattcatcacggtgcgggtggtc
gatgcagaagggcgaaccgtgcccacggcggacaatccggtgcgtttcaccgtcgaagga
cccggcgagctggtggccacggccaacggcgacccgaccagcttcattccgttttcttcg
gatgagcggccggccttcaacgggctggtgctggccatcgtgcgcgcccggcgtggcatg
cccggcactattaccgtcacggccagcgcccccggtctgcgtccggctcgtatcgtgata
gaaagccagtga
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