Ralstonia pseudosolanacearum RS: GO999_09410
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Entry
GO999_09410 CDS
T09041
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
rnc
Ralstonia pseudosolanacearum RS
Pathway
rnc00300
Lysine biosynthesis
rnc01100
Metabolic pathways
rnc01120
Microbial metabolism in diverse environments
rnc01230
Biosynthesis of amino acids
Module
rnc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rnc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GO999_09410 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rnc01002
]
GO999_09410 (dapE)
Enzymes [BR:
rnc01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
GO999_09410 (dapE)
Peptidases and inhibitors [BR:
rnc01002
]
Metallo peptidases
Family M20
GO999_09410 (dapE)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
QUP58762
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Position
2090489..2091640
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AA seq
383 aa
AA seq
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MSPTLALTEDLIRRRSVTPEDKGCQDVLIERLSAAGFQCETVVSGPDHFRVTNLWAVKRG
HAGTDGKLLVFAGHTDVVPTGPVEQWRSDPFEPTHRDGKLYGRGAADMKTSIAGFVVAAE
EFVAGHPDHAGSIGFLITSDEEGPAHDGTIKVCDLLRARGERLDYCVVGEPTSVSTLGDM
VKNGRRGSLSGKLTVNGVQGHIAYPHLAKNPIHLAAPALAALVTEQWDDGNAYFPPTTWQ
MSNIHGGTGATNVIPGHVVIDFNFRFSTASTPEGLKSRVHAILDAHGLDYTLAWTLGGEP
FLTERGKLSEALSSAIRAECGVATELSTTGGTSDGRFIAKLCPQVIEFGPPNASIHKIDE
HVDVAFIEPLKNVYRRVLETLIA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccacgcttgccctcactgaagacctgatccgccgccgctccgtcacgcccgaa
gacaagggctgccaggatgtgctgatcgaacgcctgtccgccgccggcttccaatgcgaa
accgtggtcagcgggccggaccacttccgcgtgaccaacctgtgggccgtcaagcgcggc
cacgcgggcaccgacggcaagctgctggtcttcgccggccacaccgacgtggtgccgacc
ggccccgtggaacagtggcgctccgacccgttcgagccgacccaccgcgacggcaagctc
tatggccgcggcgccgccgacatgaaaacctcgatcgccgggttcgtggtggccgccgag
gaattcgtcgccgggcatccggaccacgccggctcgatcggcttcctgatcaccagcgac
gaggaaggcccggcccacgacggcaccatcaaggtctgcgacctgctgcgcgcgcgcggc
gagcggctggactactgcgtggtcggcgagccgacctcggtgtccacgctcggcgacatg
gtcaagaacgggcggcgcggctcgctgtcgggcaaactgaccgtcaacggcgtgcagggc
cacatcgcctatccgcacctggccaagaacccgatccacctggccgcccccgcgctggcc
gccctggtgaccgagcagtgggacgacggcaacgcctacttcccgccgaccacctggcag
atgtcgaacatccacggcggcaccggcgcgaccaacgtgattccgggccacgtcgtcatc
gacttcaacttccgcttctcgacggcgagcacgccggagggcctgaagtcgcgcgtgcac
gccatcctcgacgcgcacggcctggactacacgctggcctggacgctgggcggcgagccc
ttcctgaccgagcgcggcaagctgtcggaggcgctgtcgtcggccatccgggccgagtgc
ggcgtcgccaccgaactgtcgaccaccggcggcacgtcggacggccgcttcatcgccaag
ctgtgcccgcaggtgatcgagttcgggccgcccaacgccagcatccacaagatcgacgag
cacgtcgacgtggccttcatcgagccgctcaagaacgtgtaccggcgcgtgctggaaacg
ctgatcgcctga
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