Ralstonia pseudosolanacearum RS: GO999_11835
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Entry
GO999_11835 CDS
T09041
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
rnc
Ralstonia pseudosolanacearum RS
Pathway
rnc00540
Lipopolysaccharide biosynthesis
rnc01100
Metabolic pathways
rnc01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
rnc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
GO999_11835 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rnc01005
]
GO999_11835 (rfaD)
Enzymes [BR:
rnc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
GO999_11835 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
rnc01005
]
Core region
GO999_11835 (rfaD)
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Ortholog
Paralog
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
QUP59201
LinkDB
All DBs
Position
complement(2600573..2601568)
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AA seq
331 aa
AA seq
DB search
MTIIVTGAAGFIGANLVKGLNDRGETDIIAVDNLTRADKFRNLVDCEISDYLDKTEFVER
FARGDFGKVRAIFHEGACSDTMETDGRYMMENNYRYTLALMKACLDQGVQFLYASSAATY
GASDTFREDREFEKPLNVYGYSKFLFDQIVRRTLPGALSQIVGFRYFNVYGPREQHKGRM
ASVAFHNFNQFRTEGTVKLFGEYNGYPQGGQMRDFVSVEDVVKVNLFFFDHPDKSGIFNL
GTGRAQPFNDIATTVVNTLREAEGKPALSTEELAQEGLVEYVKFPDALRGKYQCFTQADQ
GKLRAAGYSAPFLTVQEGVARYCRWLMAQPA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcatcgtgaccggcgcggccggcttcatcggcgccaacctcgtcaagggcctc
aatgaccgcggcgagaccgacatcatcgcggtcgacaacctgacccgcgccgacaagttc
aggaacctggtcgactgcgagatcagcgactacctggacaagaccgagttcgtcgagcgc
tttgcgcgcggcgacttcggcaaggtccgcgcgatcttccacgagggcgcctgctccgac
accatggagaccgacggccgctacatgatggagaacaactaccggtacacgctcgcgctg
atgaaggcctgcctggaccagggcgtgcagttcctctacgcgtcgtcggcggccacctac
ggcgcgtcggacaccttccgcgaggaccgcgagttcgagaagccgctcaacgtgtacggc
tactccaagttcctgttcgaccagatcgtgcgccgcacgctgccgggcgcgctgtcgcag
atcgttggcttccgctatttcaacgtctacggcccgcgcgagcagcacaaggggcgcatg
gcgtcggtggccttccacaacttcaaccagttccgcacggaaggcaccgtcaagctgttc
ggcgagtacaacggctatccgcagggtggccagatgcgcgacttcgtgtcggtggaggac
gtggtcaaggtcaacctgttcttcttcgaccatccggacaagtcgggcatcttcaacctc
ggtaccggccgcgcccagccgttcaacgacatcgcgaccaccgtggtgaacaccctgcgc
gaggccgaaggcaaaccggcgctctcgaccgaagagctggcgcaggaaggcctggtcgaa
tacgtgaaatttcctgatgcgctgcgcggcaaataccagtgcttcacccaggccgaccag
ggcaagctgcgcgcggctggctacagcgcgccgttcctgaccgtgcaggaaggcgtggcg
cgctactgccgctggctgatggcccagccggcctga
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